> TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa (TAF7)
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UGID:233875     UniGene Hs.438838     Homo sapiens (human)   TAF7 Order cDNA clone, Links
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa (TAF7)

Human protein-coding gene TAF7. Represented by 912 ESTs from 304 cDNA libraries. Corresponds to reference sequence NM_005642.2. [UniGene 233875 - Hs.438838]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001092471.1 PREDICTED: transcription initiation factor TFIID subunit 7 M. mulatta 100.0 348
XP_003900311.1 PREDICTED: transcription initiation factor TFIID subunit 7 P. anubis 100.0 348
XP_527047.1 PREDICTED: transcription initiation factor TFIID subunit 7 isoform 2 P. troglodytes 100.0 348
NP_005633.2 TAF7 gene product H. sapiens 100.0 348
XP_003124106.1 PREDICTED: transcription initiation factor TFIID subunit 7 S. scrofa 100.0 348
NP_786964.1 transcription initiation factor TFIID subunit 7 isoform 1 M. musculus 95.9 340
NP_001086631.1 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa X. laevis 82.8 343
NP_775367.1 taf7 gene product D. rerio 81.1 354
NP_001138023.1 TBP-associated factor 7, isoform B D. melanogaster 54.5 189
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_544308.1 PREDICTED: transcription initiation factor TFIID subunit 7 C. lupus familiaris 99.4 348
NP_001039493.1 TAF7 gene product B. taurus 99.1 348

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; skin; uterus; liver; kidney; spleen; stomach; embryonic tissue; mammary gland; ovary; thymus; uncharacterized tissue; prostate; pharynx; lung; bladder; connective tissue; eye; placenta; blood; mouth; cervix; heart; trachea; pancreas; intestine; vascular; adrenal gland; bone marrow; muscle; lymph; ascites; mixed; parathyroid; larynx; esophagus; lymph node; ganglia; bone; nerve; pituitary gland; amniotic fluid; spinal cord; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31
UniSTS entry: Chr 5 RH80950
UniSTS entry: Chr 5 SGC31525 [Map Viewer]
UniSTS entry: Chr 5 STS-U18062 [Map Viewer]
UniSTS entry: Chr 5 D5S2599 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_005642.2 Homo sapiens TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa (TAF7), mRNA PA
U18062.1 Human TFIID subunit TAFII55 (TAFII55) mRNA, complete cds P
X97999.1 H.sapiens mRNA for transcription factor IID, subunit TAFII55 P
BC013397.2 Homo sapiens TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa, mRNA (cDNA clone IMAGE:3029012), with apparent retained intron PA
AK314837.1 Homo sapiens cDNA, FLJ95724, Homo sapiens TAF7 RNA polymerase II, TATA box binding protein(TBP)-associated factor, 55kDa (TAF7), mRNA P
BC022798.1 Homo sapiens, clone IMAGE:4909007, mRNA, partial cds PA
BC032737.1 Homo sapiens TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa, mRNA (cDNA clone MGC:44874 IMAGE:5539359), complete cds PA

EST sequences (10 of 912) [Show all sequences]

AA975911.1 Clone IMAGE:1567982 lung 3' read A
AA947107.1 Clone IMAGE:1553352 kidney 3' read A
AI052691.1 Clone IMAGE:1676437 embryonic tissue 3' read A
AA946962.1 Clone IMAGE:1589258 kidney 3' read A
AI090392.1 Clone IMAGE:1666213 skin 3' read A
AI216614.1 Clone IMAGE:1883609 lung 3' read A
CB113551.1 Clone L6ChoCK0-22-D03 liver 5' read
CB116831.1 Clone L6ChoCK0-17-C06 liver 5' read P
CB115861.1 Clone L8SCK0-10-C07 liver 5' read P
CB115561.1 Clone L8SCK0-6-E07 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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