> Syntaxin 2 (STX2)
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UGID:232622     UniGene Hs.437585     Homo sapiens (human)   STX2 Order cDNA clone, Links
Syntaxin 2 (STX2)

Human protein-coding gene STX2. Represented by 136 ESTs from 70 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 232622 - Hs.437585]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001138080.1 PREDICTED: syntaxin-2 isoform 1 P. troglodytes 100.0 287
NP_919337.1 STX2 gene product H. sapiens 100.0 287
NP_031967.2 Stx2 gene product M. musculus 92.7 288
NP_001086863.1 syntaxin 2 X. laevis 78.8 288
NP_571598.1 stx1b gene product D. rerio 67.9 287
NP_524475.1 syntaxin 1A, isoform A D. melanogaster 64.7 286
NP_001022614.1 Protein UNC-64, isoform a C. elegans 60.6 282
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_003907441.1 PREDICTED: syntaxin-2 isoform 1 P. anubis 99.3 287
XP_001111568.2 PREDICTED: syntaxin-2-like M. mulatta 98.8 259

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; pancreas; testis; uterus; placenta; embryonic tissue; lung; muscle; bone; nerve; liver; adrenal gland; eye; thyroid; stomach; kidney; intestine; heart; ascites; connective tissue; ganglia; blood; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q24.33
UniSTS entry: Chr 12 WIAF-2148
UniSTS entry: Chr 12 WI-12272 [Map Viewer]
UniSTS entry: Chr 12 D6S1152E
UniSTS entry: Chr 1 D17S610
UniSTS entry: Chr 1 D7S2067E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AF052181.1 Homo sapiens clone 24790 mRNA sequence A
BC047496.1 Homo sapiens syntaxin 2, mRNA (cDNA clone MGC:51014 IMAGE:5296500), complete cds PA
NM_194356.2 Homo sapiens syntaxin 2 (STX2), transcript variant 2, mRNA PA
NM_001980.3 Homo sapiens syntaxin 2 (STX2), transcript variant 1, mRNA PA

EST sequences (10 of 136) [Show all sequences]

AI028243.1 Clone IMAGE:1645521 testis 3' read A
AI081783.1 Clone IMAGE:1662008 mixed 3' read A
AI095780.1 Clone IMAGE:1697777 uterus 3' read
AI140314.1 Clone IMAGE:1688898 mixed 3' read A
AI142820.1 Clone IMAGE:1687918 mixed 3' read A
AI143391.1 Clone IMAGE:1690304 mixed 3' read A
BX113421.1 Clone IMAGp998K02272_;_IMAGE:45906 brain A
BX091095.1 Clone IMAGp998D203860_;_IMAGE:1524451 mixed A
AI222817.1 Clone IMAGE:1925395 intestine 3' read A
AI275471.1 Clone IMAGE:1878040 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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