> Histone cluster 1, H2bk (HIST1H2BK)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:232312     UniGene Hs.437275     Homo sapiens (human)   HIST1H2BK Order cDNA clone, Links
Histone cluster 1, H2bk (HIST1H2BK)

Human protein-coding gene HIST1H2BK. Represented by 272 ESTs from 145 cDNA libraries. Corresponds to reference sequence NM_080593.2. [UniGene 232312 - Hs.437275]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001171124.1 Hist1h2be gene product M. musculus 100.0 125
NP_001102870.1 Hist1h2bk gene product R. norvegicus 100.0 125
XP_001092808.1 PREDICTED: histone H2B type 1-K-like M. mulatta 100.0 125
XP_003897250.1 PREDICTED: histone H2B type 1-J-like isoform 1 P. anubis 100.0 125
XP_518295.2 PREDICTED: histone H2B type 1-K-like isoform 3 P. troglodytes 100.0 125
NP_542160.1 HIST1H2BK gene product H. sapiens 100.0 125
XP_545412.3 PREDICTED: histone H2B type 1-K-like C. lupus familiaris 100.0 125
XP_001505089.1 PREDICTED: histone H2B type 1-K-like E. caballus 100.0 125
XP_003128266.1 PREDICTED: histone H2B type 1-K-like S. scrofa 100.0 125
XP_001251623.1 PREDICTED: histone H2B type 1 B. taurus 100.0 125
XP_004019108.1 PREDICTED: histone H2B type 1-K-like O. aries 100.0 125
XP_002714237.1 PREDICTED: histone cluster 1, H2bd-like O. cuniculus 100.0 125
NP_956411.1 hist2h2l gene product D. rerio 96.8 125
NP_001086753.1 histone H2B 1.1 X. laevis 95.2 125
NP_724342.1 histone H2B D. melanogaster 93.4 121
NP_505464.1 Protein HIS-41 C. elegans 89.3 121
XP_959440.1 histone H2B N. crassa 79.0 133
NP_010510.3 Htb1p S. cerevisiae 78.3 129
XP_001700194.1 histone H2B variant C. reinhardtii 78.2 119
NP_195877.1 histone H2B A. thaliana 77.1 130
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001362184.1 PREDICTED: histone H2B type 2-E-like M. domestica 99.2 125
XP_001506266.1 PREDICTED: histone H2B type 2-E-like O. anatinus 99.2 125

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; uterus; skin; pharynx; lung; placenta; kidney; bone marrow; embryonic tissue; prostate; mammary gland; connective tissue; intestine; brain; liver; blood; ovary; pancreas; ear; stomach; lymph node; parathyroid; bone; cervix; testis; mixed; muscle; mouth; thymus; salivary gland; bladder; ascites; eye; thyroid; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.33
UniSTS entry: Chr 6 WI-11733 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AJ223352.1 Homo sapiens mRNA for for histone H2B, clone pjG4-5-14 PA
BC051872.1 Homo sapiens histone cluster 1, H2bk, mRNA (cDNA clone MGC:60248 IMAGE:6526835), complete cds PA
BC064959.1 Homo sapiens histone cluster 1, H2bk, mRNA (cDNA clone MGC:74942 IMAGE:6093977), complete cds PA
BC108737.1 Homo sapiens histone cluster 1, H2bk, mRNA (cDNA clone MGC:131989 IMAGE:4707078), complete cds PA
BC000893.1 Homo sapiens histone cluster 1, H2bk, mRNA (cDNA clone MGC:5132 IMAGE:3463930), complete cds PA
NM_080593.2 Homo sapiens histone cluster 1, H2bk (HIST1H2BK), mRNA P

EST sequences (10 of 272) [Show all sequences]

AA973821.1 Clone IMAGE:1569267 lung 3' read A
AI034336.1 Clone IMAGE:1647714 parathyroid 3' read A
AI095521.1 Clone IMAGE:1697659 uterus 3' read A
AI138510.1 Clone IMAGE:1713767 placenta 3' read A
AI085217.1 Clone IMAGE:1665991 skin 3' read A
AI146599.1 Clone IMAGE:1704251 brain 3' read A
AI148433.1 Clone IMAGE:1738217 testis 3' read A
AI161091.1 Clone IMAGE:1720988 uterus 3' read A
BX090468.1 Clone IMAGp998H04194_;_IMAGE:135987 placenta P
AI193203.1 Clone IMAGE:1741596 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help