> Cytochrome c, somatic (CYCS)
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UGID:232097     UniGene Hs.437060     Homo sapiens (human)   CYCS Order cDNA clone, Links
Cytochrome c, somatic (CYCS)

Human protein-coding gene CYCS. Represented by 2190 ESTs from 325 cDNA libraries. Corresponds to reference sequence NM_018947.5. [UniGene 232097 - Hs.437060]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002803395.1 PREDICTED: cytochrome c-like M. mulatta 100.0 104
XP_003895289.1 PREDICTED: cytochrome c-like P. anubis 100.0 104
XP_001140708.1 PREDICTED: cytochrome c-like P. troglodytes 100.0 104
NP_061820.1 CYCS gene product H. sapiens 100.0 104
NP_031834.1 Cycs gene product M. musculus 93.3 104
NP_001085462.1 cytochrome c, somatic A X. laevis 87.6 104
NP_001002068.1 cycsb gene product D. rerio 86.5 103
NP_477176.1 cytochrome c proximal D. melanogaster 79.4 106
NP_192742.1 cytochrome c-2 A. thaliana 67.7 102
XP_001696912.1 mitochondrial cytochrome c C. reinhardtii 66.4 110
Other hits (2 of 47) [Show all]SpeciesId(%)Len(aa)
XP_002728600.1 PREDICTED: cytochrome c, somatic-like R. norvegicus 93.3 104
XP_002713768.1 PREDICTED: cytochrome c, somatic-like isoform 1 O. cuniculus 93.3 104

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; bladder; bone marrow; kidney; testis; salivary gland; skin; muscle; lung; liver; prostate; embryonic tissue; mixed; intestine; uterus; uncharacterized tissue; eye; placenta; blood; thymus; mammary gland; mouth; larynx; pancreas; bone; ovary; cervix; esophagus; heart; spleen; trachea; pharynx; lymph node; adrenal gland; stomach; parathyroid; connective tissue; lymph; thyroid; vascular; pituitary gland; ascites; nerve; umbilical cord; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p15.3
UniSTS entry: Chr 16 SHGC-60475
UniSTS entry: Chr 1 D1S3438
UniSTS entry: Chr 1 L17709
UniSTS entry: Chr 1 GDB:631802
UniSTS entry: Chr 1 RH79802
UniSTS entry: Chr 1 GDB:314949
UniSTS entry: Chr 1 GDB:434012
UniSTS entry: Chr 1 GDB:631813
UniSTS entry: Chr 7 RH78202
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (27)

BT006946.1 Homo sapiens cytochrome c, somatic mRNA, complete cds P
BC067222.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:72005 IMAGE:3685258), complete cds PA
BC068464.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:87065 IMAGE:4826114), complete cds PA
BC070346.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:88352 IMAGE:3826017), complete cds PA
BC070156.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:88136 IMAGE:6451982), complete cds PA
BC071761.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:88380 IMAGE:4656503), complete cds PA
CR542175.1 Homo sapiens full open reading frame cDNA clone RZPDo834B1024D for gene CYCS, cytochrome c, somatic; complete cds, incl. stopcodon P
D00265.1 Homo sapiens mRNA for cytochrome c, partial cds
NM_018947.5 Homo sapiens cytochrome c, somatic (CYCS), nuclear gene encoding mitochondrial protein, mRNA PA
BC005299.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:12367 IMAGE:3838954), complete cds PA
BC008477.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14765 IMAGE:4290897), complete cds PA
BC008475.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14760 IMAGE:4284529), complete cds PA
BC014361.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:24243 IMAGE:3931721), complete cds PA
BC014359.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:24234 IMAGE:3930323), complete cds PA
BC015130.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:24248 IMAGE:3932265), complete cds PA
BC016006.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:27280 IMAGE:4656402), complete cds PA
BC009607.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14763 IMAGE:4287362), complete cds PA
BC009602.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14694 IMAGE:4134675), complete cds PA
BC009587.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14650 IMAGE:4096763), complete cds PA
BC009582.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14636 IMAGE:4082112), complete cds PA
BC009579.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14603 IMAGE:4045034), complete cds PA
BC009578.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:14602 IMAGE:3961416), complete cds PA
BC022330.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:22759 IMAGE:4280695), complete cds PA
BC021994.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone MGC:24510 IMAGE:4096609), complete cds PA
AK311836.1 Homo sapiens cDNA, FLJ92098, Homo sapiens cytochrome c (HCS), mRNA P
AL713681.1 Homo sapiens mRNA; cDNA DKFZp761O0217 (from clone DKFZp761O0217) PA
BC024216.1 Homo sapiens cytochrome c, somatic, mRNA (cDNA clone IMAGE:4824157) PA

EST sequences (10 of 2190) [Show all sequences]

AA969790.1 Clone IMAGE:1573495 kidney 3' read A
AA992243.1 Clone IMAGE:1620367 testis 3' read A
AI002407.1 Clone IMAGE:1601956 lung 3' read A
AI014390.1 Clone IMAGE:1635337 kidney 3' read PA
AI023266.1 Clone IMAGE:1642147 testis 3' read A
AI031967.1 Clone IMAGE:1650740 parathyroid 3' read A
AI032006.1 Clone IMAGE:1650832 parathyroid 3' read A
AI052512.1 Clone IMAGE:1676580 embryonic tissue 3' read A
AI061058.1 Clone IMAGE:1699425 kidney 3' read A
AI066487.1 Clone IMAGE:1679281 skin 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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