| UGID:232077 UniGene Hs.437040 Homo sapiens (human) PTPN21 |
|
Protein tyrosine phosphatase, non-receptor type 21 (PTPN21)
Human protein-coding gene PTPN21. Represented by 201 ESTs from 100 cDNA libraries. Corresponds to reference sequence NM_007039.3. [UniGene 232077 - Hs.437040]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
PTPN21 gene product |
H. sapiens |
100.0 |
1173 |
|
|
Ptpn21 gene product |
M. musculus |
93.5 |
1175 |
|
|
PREDICTED: tyrosine-protein phosphatase non-receptor type 21 |
D. rerio |
82.8 |
1167 |
| Other hits (2 of 25) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: tyrosine-protein phosphatase non-receptor type 21 |
P. troglodytes |
99.5 |
1173 |
|
|
PREDICTED: tyrosine-protein phosphatase non-receptor type 21 isoform 1 |
M. mulatta |
99.1 |
1173 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
|
EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
mixed; placenta; uncharacterized tissue; brain; esophagus; mouth; uterus; parathyroid; heart; muscle; mammary gland; ear; bone; prostate; skin; embryonic tissue; testis; kidney; thyroid; thymus; stomach; pituitary gland; lung; pancreas; intestine; eye; ovary; connective tissue; liver; ganglia; vascular |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (5)
|
NM_007039.3 |
Homo sapiens protein tyrosine phosphatase, non-receptor type 21 (PTPN21), mRNA |
P |
|
AK310480.1 |
Homo sapiens cDNA, FLJ17522 |
P |
|
BC143847.1 |
Homo sapiens cDNA clone IMAGE:9052362 |
P |
|
BC143846.1 |
Homo sapiens cDNA clone IMAGE:9052361, containing frame-shift errors |
P |
|
X79510.1 |
H.sapiens mRNA for protein-tyrosine-phosphatase D1 |
P |
EST sequences (10 of 201) [Show all sequences]
|
AA983849.1 |
Clone IMAGE:1581454 |
mixed |
3' read |
A |
|
AA910386.1 |
Clone IMAGE:1521105 |
lung |
3' read |
A |
|
AA909192.1 |
Clone IMAGE:1523252 |
mixed |
3' read |
A |
|
AA923773.1 |
Clone IMAGE:1543453 |
mixed |
3' read |
P |
|
AI130825.1 |
Clone IMAGE:1709154 |
heart |
3' read |
P |
|
R23593.1 |
Clone IMAGE:132088 |
placenta |
5' read |
|
|
BX094678.1 |
Clone IMAGp998L10234_;_IMAGE:151449 |
placenta |
|
A |
|
BX092903.1 |
Clone IMAGp998M18193_;_IMAGE:135737 |
placenta |
|
|
|
AI186487.1 |
Clone IMAGE:1725264 |
placenta |
3' read |
P |
|
AI187285.1 |
Clone IMAGE:1751365 |
testis |
3' read |
A |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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