> SET nuclear oncogene (SET)
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UGID:231724     UniGene Hs.436687     Homo sapiens (human)   SET Order cDNA clone, Links
SET nuclear oncogene (SET)

Human protein-coding gene SET. Represented by 1351 ESTs from 452 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 231724 - Hs.436687]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892243.1 PREDICTED: protein SET-like P. anubis 100.0 289
XP_003312346.1 PREDICTED: protein SET-like isoform 1 P. troglodytes 100.0 289
NP_001116293.1 SET gene product H. sapiens 100.0 289
XP_001367625.2 PREDICTED: protein SET-like M. domestica 100.0 276
XP_002197965.1 PREDICTED: protein SET T. guttata 100.0 276
NP_001025862.2 SET gene product G. gallus 100.0 276
NP_001231019.1 protein SET S. scrofa 100.0 276
NP_001033653.1 SET gene product B. taurus 100.0 276
XP_002709599.1 PREDICTED: SET translocation-like O. cuniculus 100.0 276
XP_851207.1 PREDICTED: protein SET C. lupus familiaris 99.7 288
NP_001191804.1 Set gene product M. musculus 99.6 276
XP_003211295.1 PREDICTED: protein SET-like M. gallopavo 99.6 271
NP_001084174.1 SET nuclear oncogene X. laevis 98.9 277
NP_958876.1 setb gene product D. rerio 98.2 274
NP_650438.2 Set D. melanogaster 70.0 266
NP_177596.1 template-activating factor I A. thaliana 46.0 202
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_004005645.1 PREDICTED: protein SET isoform 1 O. aries 99.3 292
XP_001500515.3 PREDICTED: protein SET-like E. caballus 99.3 289

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; embryonic tissue; uterus; mixed; pancreas; testis; liver; intestine; uncharacterized tissue; ovary; skin; placenta; prostate; kidney; eye; bone; heart; mammary gland; connective tissue; blood; stomach; bone marrow; bladder; lymph node; ascites; larynx; muscle; ear; thymus; thyroid; amniotic fluid; cervix; pharynx; mouth; vascular; lymph; adrenal gland; parathyroid; salivary gland; spleen; pituitary gland; nerve; ganglia; umbilical cord; esophagus; tonsil; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34
UniSTS entry: Chr 9 WI-7839
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

BC056245.1 Homo sapiens cDNA clone IMAGE:6698185, partial cds A
AY349172.1 Homo sapiens inhibitor-2 of protein phosphatase-2A mRNA, complete cds P
NM_003011.3 Homo sapiens SET nuclear oncogene (SET), transcript variant 2, mRNA PA
CR536543.1 Homo sapiens full open reading frame cDNA clone RZPDo834H0620D for gene SET, SET translocation (myeloid leukemia-associated); complete cds, incl. stopcodon P
CR542050.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0736D for gene SET, SET translocation (myeloid leukemia-associated); complete cds, without stopcodon P
D45198.1 Homo sapiens set mRNA for template acyivating factor-I alpha, complete cds P
AK223556.1 Homo sapiens mRNA for SET translocation (myeloid leukemia-associated) variant, clone: FCC127D11 P
M93651.1 Human set gene, complete cds PA
EF534308.1 Homo sapiens SET mRNA, complete cds P
AK311346.1 Homo sapiens cDNA, FLJ18388 P
AK315313.1 Homo sapiens cDNA, FLJ96345, Homo sapiens SET translocation (myeloid leukemia-associated) (SET),mRNA P
NM_001122821.1 Homo sapiens SET nuclear oncogene (SET), transcript variant 1, mRNA PA
BC032749.1 Homo sapiens SET nuclear oncogene, mRNA (cDNA clone MGC:45315 IMAGE:5587291), complete cds PA
AK300794.1 Homo sapiens cDNA FLJ51749 complete cds, highly similar to Protein SET P
AK300609.1 Homo sapiens cDNA FLJ59759 complete cds, highly similar to Protein SET P
BC014567.2 Homo sapiens cDNA clone IMAGE:3010577, containing frame-shift errors PA
Y16709.1 Homo sapiens mRNA from HIV associated non-Hodgkin's lymphoma (clone hl1-14)
Y16700.1 Homo sapiens mRNA from HIV associated non-Hodgkin's lymphoma (clone hl1-9)
Y16698.1 Homo sapiens mRNA from HIV associated non-Hodgkin's lymphoma (clone hl1-98)
X75091.1 H.sapiens mRNA for HLA-DR associated protein II (PHAPII) P
NM_001248001.1 Homo sapiens SET nuclear oncogene (SET), transcript variant 4, mRNA PA
NM_001248000.1 Homo sapiens SET nuclear oncogene (SET), transcript variant 3, mRNA PA
JF729356.1 Homo sapiens SET mRNA, complete cds P
U51924.1 Human phosphatase 2A inhibitor I2PP2A mRNA, complete cds P

EST sequences (10 of 1351) [Show all sequences]

AA961081.1 Clone IMAGE:1569776 lung 3' read A
AA886219.1 Clone IMAGE:1492487 kidney 3' read A
AA974937.1 Clone IMAGE:1558621 lung 3' read A
AA975070.1 Clone IMAGE:1555595 kidney 3' read A
AA975750.1 Clone IMAGE:1591125 kidney 3' read
AA978156.1 Clone IMAGE:1273815 bone A
AA985412.1 Clone IMAGE:1592836 kidney 3' read A
AA985429.1 Clone IMAGE:1592862 kidney 3' read
AA989103.1 Clone IMAGE:1601697 lung 3' read
AA989168.1 Clone IMAGE:1594062 kidney 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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