> TSC22 domain family, member 1 (TSC22D1)
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UGID:231420     UniGene Hs.436383     Homo sapiens (human)   TSC22D1 Order cDNA clone, Links
TSC22 domain family, member 1 (TSC22D1)

Human protein-coding gene TSC22D1. Represented by 1883 ESTs from 462 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 231420 - Hs.436383]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_904358.2 TSC22D1 gene product H. sapiens 100.0 1072
NP_001029549.1 TSC22D1 gene product B. taurus 100.0 143
XP_003318064.1 PREDICTED: TSC22 domain family protein 1 P. troglodytes 99.8 1071
NP_997535.2 Tsc22d1 gene product M. musculus 91.4 1076
NP_997910.1 tsc22d1 gene product D. rerio 90.3 144
NP_001088039.1 TSC22 domain family, member 1 X. laevis 89.0 136
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_003913877.1 PREDICTED: TSC22 domain family protein 1 P. anubis 98.9 1067
XP_001514206.1 PREDICTED: TSC22 domain family protein 1-like O. anatinus 98.6 143

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; lung; pancreas; intestine; testis; embryonic tissue; placenta; kidney; prostate; eye; stomach; skin; connective tissue; mixed; heart; uncharacterized tissue; cervix; ovary; muscle; liver; ear; mammary gland; thyroid; parathyroid; esophagus; pharynx; salivary gland; ascites; nerve; bone; trachea; ganglia; thymus; umbilical cord; blood; pituitary gland; adipose tissue; larynx; bladder; spleen; mouth; adrenal gland; vascular; lymph node; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q14
UniSTS entry: Chr 13 WI-13180 [Map Viewer]
UniSTS entry: Chr 13 IB1310
UniSTS entry: Chr 13 RH48616 [Map Viewer]
UniSTS entry: Chr 13 D13S1158
UniSTS entry: Chr 13 D13S869E
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (27)

AJ222700.1 Homo sapiens mRNA for TSC-22 protein P
NM_183422.3 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 1, mRNA P
NM_006022.3 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 2, mRNA P
AY491432.1 Homo sapiens colorectal cancer-related mRNA sequence
BC069207.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:6671151), complete cds PA
CR456711.1 Homo sapiens full open reading frame cDNA clone RZPDo834G053D for gene TSC22, transforming growth factor beta-stimulated protein TSC-22; complete cds, incl. stopcodon P
CR627459.1 Homo sapiens mRNA; cDNA DKFZp686O19206 (from clone DKFZp686O19206) PA
AK027071.1 Homo sapiens cDNA: FLJ23418 fis, clone HEP21245, highly similar to HSU35048 Human TSC-22 protein mRNA PA
BC105277.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:6463667), complete cds PA
BC000456.2 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:2821602), complete cds PA
D87061.1 Homo sapiens hucep-2 mRNA for cerebral protein-2, complete cds P
BC146679.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:40148903), complete cds PA
BC146664.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:40148059), complete cds PA
BC016867.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:3850392), complete cds PA
BC009528.2 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone IMAGE:3890809) A
AK290751.1 Homo sapiens cDNA FLJ78231 complete cds, highly similar to Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 2, mRNA P
U35048.1 Human TSC-22 protein mRNA, complete cds P
AK312345.1 Homo sapiens cDNA, FLJ92664, Homo sapiens transforming growth factor beta-stimulated protein TSC-22 (TSC22), mRNA P
AB082525.1 Homo sapiens mRNA for KIAA1994 protein P
AK091854.1 Homo sapiens cDNA FLJ34535 fis, clone HLUNG2008348, highly similar to Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 1, mRNA PA
X97299.1 H.sapiens mRNA for Ptg-2 protein
BC136482.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone MGC:168094 IMAGE:9020471), complete cds P
BC136475.1 Homo sapiens TSC22 domain family, member 1, mRNA (cDNA clone MGC:168087 IMAGE:9020464), complete cds P
NM_001243799.1 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 5, mRNA P
NM_001243797.1 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 3, mRNA P
NM_001243798.1 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 4, mRNA P
D38585.1 Homo sapiens mRNA for TSC-22, complete cds P

EST sequences (10 of 1883) [Show all sequences]

AA962273.1 Clone IMAGE:1602161 lung 3' read A
AA976635.1 Clone IMAGE:1585328 lung 3' read A
R14830.1 Clone IMAGE:30199 brain 5' read P
AA991470.1 Clone IMAGE:1609031 mammary gland 3' read A
R16390.1 Clone IMAGE:29828 brain 5' read
AA995956.1 Clone IMAGE:1635840 kidney 3' read A
AI002974.1 Clone IMAGE:1699554 kidney 3' read A
AA906853.1 Clone IMAGE:1523993 mixed 3' read A
AI018415.1 Clone IMAGE:1641895 testis 3' read
AI033766.1 Clone IMAGE:1647664 parathyroid 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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