> DDB1 and CUL4 associated factor 6 (DCAF6)
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UGID:230778     UniGene Hs.435741     Homo sapiens (human)   DCAF6 Links
DDB1 and CUL4 associated factor 6 (DCAF6)

Human protein-coding gene DCAF6. Represented by 765 ESTs from 272 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 230778 - Hs.435741]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001174811.1 PREDICTED: DDB1- and CUL4-associated factor 6 isoform 11 P. troglodytes 100.0 950
NP_001185885.1 DCAF6 gene product H. sapiens 100.0 950
XP_003893560.1 PREDICTED: DDB1- and CUL4-associated factor 6 P. anubis 99.7 859
XP_001091235.1 PREDICTED: DDB1- and CUL4-associated factor 6 isoform 2 M. mulatta 99.6 950
NP_083035.1 DDB1- and CUL4-associated factor 6 M. musculus 98.3 875
NP_001098734.1 DDB1 and CUL4 associated factor 6 X. laevis 82.0 758
NP_001138562.1 DDB1- and CUL4-associated factor 6 D. rerio 81.9 901
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
NP_001178158.1 DDB1- and CUL4-associated factor 6 B. taurus 98.0 876
XP_001490624.1 PREDICTED: DDB1- and CUL4-associated factor 6 E. caballus 97.8 919

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; mixed; kidney; mouth; thyroid; embryonic tissue; heart; adrenal gland; skin; eye; bone; blood; tonsil; muscle; bladder; uncharacterized tissue; lymph; mammary gland; thymus; lung; intestine; placenta; connective tissue; uterus; vascular; trachea; liver; prostate; cervix; spleen; adipose tissue; ovary; lymph node; pancreas; pharynx; stomach; bone marrow; esophagus; amniotic fluid; larynx; parathyroid; ascites; nerve; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q24.2
UniSTS entry: Chr 1 RH64705
UniSTS entry: Chr 15 RH45968 [Map Viewer]
UniSTS entry: Chr 15 D1S2526
UniSTS entry: D1S2359
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AK000984.1 Homo sapiens cDNA FLJ10122 fis, clone HEMBA1002937 P
NM_018442.3 Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 1, mRNA PA
AF124434.1 Homo sapiens HOM-TES-95 tumor antigen mRNA, complete sequence PA
AF150734.1 Homo sapiens PC326 protein (PC326) mRNA, complete cds PA
AY766164.1 Homo sapiens nuclear receptor interaction protein (NRIP) mRNA, complete cds PA
NM_001017977.2 Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 2, mRNA PA
AL136738.1 Homo sapiens mRNA; cDNA DKFZp434C2211 (from clone DKFZp434C2211) PA
AK226181.1 Homo sapiens mRNA for IQ motif and WD repeats 1 isoform b variant, clone: ek00226 PA
DQ768089.1 Homo sapiens androgen receptor complex-associated protein (ARCAP) mRNA, complete cds PA
BC025262.1 Homo sapiens IQ motif and WD repeats 1, mRNA (cDNA clone IMAGE:4763336), partial cds PA
AK093970.1 Homo sapiens cDNA FLJ36651 fis, clone UTERU2000095, highly similar to Homo sapiens PC326 protein (PC326) mRNA P
AK297847.1 Homo sapiens cDNA FLJ58595 complete cds, highly similar to Homo sapiens IQ motif and WD repeats 1 (IQWD1), transcript variant 1, mRNA P
NM_001198957.1 Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 4, mRNA PA
NM_001198956.1 Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 3, mRNA PA
AF116725.1 Homo sapiens MSTP055 mRNA, complete cds PA

EST sequences (10 of 765) [Show all sequences]

R14260.1 Clone IMAGE:28641 brain 5' read P
AA971016.1 Clone IMAGE:1582054 mixed 3' read PA
AA973047.1 Clone IMAGE:1577923 mixed 3' read
AI004624.1 Clone IMAGE:1626027 mixed 3' read PA
AI026772.1 Clone IMAGE:1645274 testis 3' read PA
AI082201.1 Clone IMAGE:1662198 mixed 3' read
CB049184.1 Clone IMAGE:3271238 prostate 5' read
CB049183.1 Clone IMAGE:3271238 prostate 3' read PA
CB054127.1 Clone IMAGE:3291347 brain 3' read PA
CB054128.1 Clone IMAGE:3291347 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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