> SET binding protein 1 (SETBP1)
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UGID:230495     UniGene Hs.435458     Homo sapiens (human)   SETBP1 Order cDNA clone, Links
SET binding protein 1 (SETBP1)

Human protein-coding gene SETBP1. Represented by 145 ESTs from 84 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 230495 - Hs.435458]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056374.2 SETBP1 gene product H. sapiens 100.0 1595
XP_512106.2 PREDICTED: SET-binding protein isoform 2 P. troglodytes 99.9 1595
XP_003914383.1 PREDICTED: SET-binding protein P. anubis 99.5 1595
NP_444329.2 Setbp1 gene product M. musculus 92.7 1581
XP_001337169.4 PREDICTED: SET-binding protein-like D. rerio 62.6 593
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
XP_002808207.1 PREDICTED: LOW QUALITY PROTEIN: SET-binding protein-like M. mulatta 99.4 1595
XP_001497935.1 PREDICTED: SET-binding protein E. caballus 96.8 1596

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; embryonic tissue; ovary; mouth; lung; pancreas; mammary gland; connective tissue; prostate; stomach; testis; mixed; lymph node; bone; muscle; trachea; uterus; placenta; eye; uncharacterized tissue; thyroid; larynx; intestine; ear; heart; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q21.1
UniSTS entry: Chr 18 MARC_9665-9666:996688503:1
UniSTS entry: Chr 18 SETBP1__5386
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AB022660.1 Homo sapiens mRNA for SET-binding protein (SEB), complete cds P
AK123972.1 Homo sapiens cDNA FLJ41978 fis, clone SKNSH2000482
BC062338.1 Homo sapiens SET binding protein 1, mRNA (cDNA clone IMAGE:6338507), complete cds PA
NM_015559.2 Homo sapiens SET binding protein 1 (SETBP1), transcript variant 1, mRNA P
BC146776.1 Homo sapiens SET binding protein 1, mRNA (cDNA clone MGC:166855 IMAGE:9007225), complete cds PA
AK091663.1 Homo sapiens cDNA FLJ34344 fis, clone FEBRA2010299, moderately similar to SET-binding protein (SEB) P
AL832945.1 Homo sapiens mRNA; cDNA DKFZp666J1210 (from clone DKFZp666J1210)
NM_001130110.1 Homo sapiens SET binding protein 1 (SETBP1), transcript variant 2, mRNA PA
AB007897.2 Homo sapiens KIAA0437 mRNA, partial cds P

EST sequences (10 of 145) [Show all sequences]

AA970371.1 Clone IMAGE:1580507 mixed 3' read
AI002577.1 Clone IMAGE:1593659 kidney 3' read
R17655.1 Clone IMAGE:32473 brain 5' read
AI190232.1 Clone IMAGE:1732760 heart 3' read A
AI193348.1 Clone IMAGE:1742945 lung 3' read A
AI244751.1 Clone IMAGE:1867448 kidney 3' read
AI356994.1 Clone IMAGE:2001403 lymph node 3' read
AI382219.1 Clone IMAGE:2074660 uncharacterized tissue 3' read
CB217817.1 Clone IMAGE:5795304 bone 3' read
CB217862.1 Clone IMAGE:5795400 bone 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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