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ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (ATP8A1)
Human protein-coding gene ATP8A1. Represented by 256 ESTs from 112 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 230089 - Hs.435052]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
ATP8A1 gene product |
H. sapiens |
100.0 |
1163 |
|
|
PREDICTED: probable phospholipid-transporting ATPase IA isoform 1 |
M. mulatta |
99.9 |
1163 |
|
|
PREDICTED: probable phospholipid-transporting ATPase IA isoform 1 |
P. troglodytes |
99.9 |
1163 |
|
|
PREDICTED: LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase IA |
P. anubis |
99.7 |
1163 |
|
|
Atp8a1 gene product |
M. musculus |
98.6 |
1163 |
|
|
PREDICTED: LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase IB |
D. rerio |
73.9 |
1170 |
|
|
CG42321, isoform E |
D. melanogaster |
62.6 |
1112 |
|
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Protein TAT-1, isoform a |
C. elegans |
54.2 |
1110 |
|
|
hypothetical protein NCU00352 |
N. crassa |
52.9 |
1117 |
|
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aminophospholipid-translocating P4-type ATPase DRS2 |
S. cerevisiae |
50.2 |
259 |
|
|
phospholipid-transporting ATPase |
C. reinhardtii |
49.5 |
202 |
|
|
phospholipid-translocating ATPase |
A. thaliana |
47.6 |
982 |
| Other hits (2 of 58) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: probable phospholipid-transporting ATPase IA isoform 1 |
C. lupus familiaris |
99.1 |
1163 |
|
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PREDICTED: LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase IA |
O. aries |
98.9 |
1164 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
|
EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
brain; uncharacterized tissue; embryonic tissue; eye; kidney; pancreas; lymph node; mixed; muscle; prostate; pharynx; placenta; adrenal gland; pituitary gland; blood; mouth; esophagus; spleen; thymus; parathyroid; vascular; liver; intestine; uterus; testis; connective tissue; ear; lymph; skin; nerve; stomach; lung; ovary; bone; adipose tissue; pineal gland |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (11)
|
AB013452.1 |
Homo sapiens mRNA for ATPaseII, complete cds |
P |
|
BX648675.1 |
Homo sapiens mRNA; cDNA DKFZp686C1850 (from clone DKFZp686C1850) |
PA |
|
AB209687.1 |
Homo sapiens mRNA for ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 variant protein |
P |
|
AK027252.1 |
Homo sapiens cDNA: FLJ23599 fis, clone LNG15473, highly similar to AF035315 Homo sapiens clone 23664 and 23905 mRNA sequence |
A |
|
BC109318.1 |
Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1, mRNA (cDNA clone MGC:130043 IMAGE:40036538), complete cds |
P |
|
BC109317.1 |
Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1, mRNA (cDNA clone MGC:130042 IMAGE:40036536), complete cds |
P |
|
NM_006095.2 |
Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (ATP8A1), transcript variant 1, mRNA |
PA |
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NM_001105529.1 |
Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (ATP8A1), transcript variant 2, mRNA |
PA |
|
BC020943.1 |
Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1, mRNA (cDNA clone IMAGE:4816327), complete cds |
A |
|
AF067820.1 |
Homo sapiens ATPase II mRNA, partial cds |
P |
|
AF035315.1 |
Homo sapiens clone 23664 and 23905 mRNA sequence |
A |
EST sequences (10 of 256) [Show all sequences]
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AI026127.1 |
Clone IMAGE:1647356 |
parathyroid |
3' read |
A |
|
AI033689.1 |
Clone IMAGE:1647978 |
parathyroid |
3' read |
A |
|
AI041510.1 |
Clone IMAGE:1648865 |
parathyroid |
3' read |
A |
|
BX089396.1 |
Clone IMAGp998B2474_;_IMAGE:23877 |
brain |
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A |
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BX089438.1 |
Clone IMAGp998D03730_;_IMAGE:322514 |
parathyroid |
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|
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AI204896.1 |
Clone IMAGE:1684742 |
brain |
3' read |
|
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AI218581.1 |
Clone IMAGE:1845168 |
mixed |
3' read |
A |
|
AI267759.1 |
Clone IMAGE:2022328 |
brain |
|
|
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R38285.1 |
Clone IMAGE:23877 |
brain |
3' read |
A |
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AI367652.1 |
Clone IMAGE:1934553 |
embryonic tissue |
3' read |
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Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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