DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 (DDX53)

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UGID:229453 UniGene Hs.434416 Homo sapiens (human) DDX53

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DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 (DDX53)

Human protein-coding gene DDX53. Represented by 9 ESTs from 6 cDNA libraries. Corresponds to reference sequence NM_182699.3. [UniGene 229453 - Hs.434416]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_874358.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	DDX53 gene product	H. sapiens	100.0	630
NP_001177973.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	probable ATP-dependent RNA helicase DDX43	M. musculus	68.9	604
NP_649767.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CG7878	D. melanogaster	61.6	133
NP_001108061.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ddx43 gene product	D. rerio	51.8	282
Other hits (2 of 36) [Show all]		Species	Id(%)	Len(aa)
XP_003317435.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: probable ATP-dependent RNA helicase DDX53	P. troglodytes	96.8	630
XP_003917545.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: probable ATP-dependent RNA helicase DDX53	P. anubis	89.2	629

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; mixed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	X
	Map position:	Xp22.11

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY039237.1	Homo sapiens DEAD-box protein CAGE (CAGE) mRNA, complete cds	PA
BC051703.1	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 53, mRNA (cDNA clone MGC:39552 IMAGE:5297066), complete cds	PA
NM_182699.3	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 (DDX53), mRNA	PA
BC067878.1	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 53, mRNA (cDNA clone MGC:87571 IMAGE:5295819), complete cds	PA

EST sequences (9)

CD557286.1	Clone IMAGE:30387726	testis	5' read	P
EL736805.1		mixed	5' read	P
BI464283.1	Clone IMAGE:5271168	testis	5' read	P
BI560190.1	Clone IMAGE:5295819	testis	5' read	P
BI560451.1	Clone IMAGE:5297066	testis	5' read	P
HY032035.1	Clone H04D110N16	testis		P
HY216562.1	Clone H04D110N16	testis		P
AA781181.1	Clone 1391262	testis	3' read	P
AA933999.1	Clone IMAGE:1564063	mixed	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria