> Forkhead box N3 (FOXN3)
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UGID:229323     UniGene Hs.434286     Homo sapiens (human)   FOXN3 Order cDNA clone, Links
Forkhead box N3 (FOXN3)

Human protein-coding gene FOXN3. Represented by 560 ESTs from 236 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 229323 - Hs.434286]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_510111.2 PREDICTED: forkhead box protein N3 isoform 5 P. troglodytes 100.0 489
NP_001078940.1 FOXN3 gene product H. sapiens 100.0 489
XP_001087970.1 PREDICTED: forkhead box protein N3-like isoform 2 M. mulatta 99.8 491
XP_003902199.1 PREDICTED: forkhead box protein N3-like P. anubis 99.8 491
NP_899009.2 forkhead box protein N3 M. musculus 97.2 456
NP_001090178.1 forkhead box protein N3 X. laevis 88.2 484
NP_001116217.1 checkpoint suppressor 1 D. rerio 67.4 436
NP_996362.2 checkpoint suppressor homologue, isoform B D. melanogaster 60.6 142
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001496067.1 PREDICTED: forkhead box protein N3 isoform 1 E. caballus 98.0 487
NP_001038001.1 FOXN3 gene product S. scrofa 97.5 484

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lymph node; mixed; uncharacterized tissue; lung; eye; skin; stomach; embryonic tissue; intestine; ovary; muscle; bone marrow; testis; kidney; parathyroid; uterus; liver; thymus; placenta; pancreas; connective tissue; heart; mammary gland; bladder; salivary gland; mouth; bone; thyroid; pharynx; larynx; ear; ascites; lymph; prostate; adipose tissue; blood; pineal gland; spleen; adrenal gland; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q31.3
UniSTS entry: Chr 3 D17S1981
UniSTS entry: Chr 14 A006I41 [Map Viewer]
UniSTS entry: Chr 14 G20858
UniSTS entry: Chr 14 SHGC-31015 [Map Viewer]
UniSTS entry: Chr 18 RH80006
UniSTS entry: Chr 1 RH79968
UniSTS entry: Chr 14 GDB:451535
UniSTS entry: Chr 14 RH78193 [Map Viewer]
UniSTS entry: Chr 14 SHGC-84090
UniSTS entry: Chr 1 CHES1_8253
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK123929.1 Homo sapiens cDNA FLJ41935 fis, clone PERIC2005117
NM_005197.3 Homo sapiens forkhead box N3 (FOXN3), transcript variant 2, mRNA P
AK225967.1 Homo sapiens mRNA for checkpoint suppressor 1 variant, clone: FCC113E08 PA
BC007506.2 Homo sapiens forkhead box N3, mRNA (cDNA clone MGC:4149 IMAGE:3028787), complete cds PA
BC010460.1 Homo sapiens forkhead box N3, mRNA (cDNA clone IMAGE:4215125) A
NM_001085471.1 Homo sapiens forkhead box N3 (FOXN3), transcript variant 1, mRNA P
AK055175.1 Homo sapiens cDNA FLJ30613 fis, clone CTONG2000855
AK314098.1 Homo sapiens cDNA, FLJ94781
AK308053.1 Homo sapiens cDNA, FLJ98001 P
BC010227.1 Homo sapiens forkhead box N3, mRNA (cDNA clone IMAGE:4150549), with apparent retained intron PA
AF116643.2 Homo sapiens PRO1635 mRNA, complete cds
U68723.1 Human checkpoint suppressor 1 mRNA, complete cds P

EST sequences (10 of 560) [Show all sequences]

AA969536.1 Clone IMAGE:1572981 kidney 3' read P
AA972690.1 Clone IMAGE:1584202 mixed 3' read A
AA972694.1 Clone IMAGE:1584214 mixed 3' read A
R08890.1 Clone IMAGE:127545 mixed 3' read
AA976786.1 Clone IMAGE:1586859 uncharacterized tissue 3' read P
AA995758.1 Clone IMAGE:1606394 kidney 3' read A
AI024005.1 Clone IMAGE:1652166 mixed 3' read A
AA947170.1 Clone IMAGE:1560563 mixed 3' read A
AI033321.1 Clone IMAGE:1655121 mixed 3' read P
AI033346.1 Clone IMAGE:1655168 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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