Shisa homolog 2 (Xenopus laevis) (SHISA2)

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UGID:228977 UniGene Hs.433791 Homo sapiens (human) SHISA2

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Shisa homolog 2 (Xenopus laevis) (SHISA2)

Human protein-coding gene SHISA2. Represented by 30 ESTs from 22 cDNA libraries. Corresponds to reference sequence NM_001007538.1. [UniGene 228977 - Hs.433791]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001007539.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SHISA2 gene product	H. sapiens	100.0	294
XP_001155896.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein shisa-2 homolog	P. troglodytes	99.7	294
NP_663438.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Shisa2 gene product	M. musculus	93.6	294
NP_001086445.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	protein shisa-2 precursor	X. laevis	82.2	286
XP_003201351.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein shisa-2-like	D. rerio	65.5	264
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_001093015.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein shisa-2 homolog	M. mulatta	99.3	294
XP_003913737.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein shisa-2 homolog	P. anubis	99.0	294

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	kidney; lung; mixed; liver; thyroid; embryonic tissue; uncharacterized tissue; vascular; bone; connective tissue; pharynx; blood; larynx

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	13
Map position:	13q12.13
UniSTS entry:	Chr 4	RH75489
UniSTS entry:	Chr 1	GDB:335751

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY358775.1	Homo sapiens clone DNA170212 WGAR9166 (UNQ9166) mRNA, complete cds	P
NM_001007538.1	Homo sapiens shisa homolog 2 (Xenopus laevis) (SHISA2), mRNA	P
BC132898.1	Homo sapiens shisa homolog 2 (Xenopus laevis), mRNA (cDNA clone MGC:164529 IMAGE:40146920), complete cds	P
BC137092.1	Homo sapiens shisa homolog 2 (Xenopus laevis), mRNA (cDNA clone MGC:168712 IMAGE:9021089), complete cds	P

EST sequences (10 of 30) [Show all sequences]

AA976712.1	Clone IMAGE:1585543	lung	3' read	A
AA983251.1	Clone IMAGE:1591939	kidney	3' read	A
CB115008.1	Clone L10ChoCK0-4-A09	liver	5' read
CB132665.1	Clone L14ChoiCK0-8-A09	liver	5' read
CB135007.1	Clone L14ChoiCK0-23-C05	liver	5' read
AI694685.1	Clone IMAGE:2343710	lung	3' read
CB955850.1	Clone IMAGE:30349688	mixed	5' read
AW664964.1	Clone IMAGE:2980348	mixed	3' read	A
AW769715.1	Clone IMAGE:3006334	kidney	3' read	A
AW962864.1		uncharacterized tissue

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria