> Serine/arginine repetitive matrix 2 (SRRM2)
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UGID:228724     UniGene Hs.433343     Homo sapiens (human)   SRRM2 Links
Serine/arginine repetitive matrix 2 (SRRM2)

Human protein-coding gene SRRM2. Represented by 1850 ESTs from 694 cDNA libraries. Corresponds to reference sequence NM_016333.3. [UniGene 228724 - Hs.433343]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003314977.1 PREDICTED: hypothetical protein LOC453842 P. troglodytes 99.9 2751
NP_780438.2 serine/arginine repetitive matrix protein 2 M. musculus 93.7 2606
NP_001025246.2 serine/arginine repetitive matrix 2 D. rerio 55.6 259
NP_001027103.1 CG7971, isoform D D. melanogaster 49.4 174
NP_001103669.1 serine/arginine repetitive matrix protein 3 H. sapiens 46.0 215
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_001087100.2 PREDICTED: serine/arginine repetitive matrix protein 2-like isoform 1 M. mulatta 99.3 407
XP_003916451.1 PREDICTED: serine/arginine repetitive matrix protein 2 P. anubis 99.3 407

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; intestine; lung; uncharacterized tissue; prostate; mammary gland; placenta; embryonic tissue; uterus; testis; blood; kidney; thyroid; thymus; larynx; skin; lymph node; liver; eye; stomach; ovary; pancreas; mixed; trachea; umbilical cord; epididymis; mouth; bladder; pharynx; ganglia; muscle; spleen; cervix; esophagus; lymph; bone; nerve; connective tissue; heart; amniotic fluid; bone marrow; adipose tissue; vascular; tonsil; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.3
UniSTS entry: Chr 16 SHGC-61065
UniSTS entry: Chr 16 SHGC-61169
UniSTS entry: Chr 16 MARC_7863-7864:996688108:1
UniSTS entry: Chr 16 D16S436E
UniSTS entry: Chr 16 D16S439E
UniSTS entry: Chr 16 D16S2549E
UniSTS entry: Chr 16 SRRM2_9362
UniSTS entry: Chr 16 SHGC-61375 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

BC046104.1 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:6203679), partial cds PA
BX537511.1 Homo sapiens mRNA; cDNA DKFZp779C108 (from clone DKFZp779C108) A
AB016091.1 Homo sapiens mRNA for RNA binding protein, partial cds, clone: R86 P
AB016092.1 Homo sapiens mRNA for RNA binding protein, complete cds P
BX647088.1 Homo sapiens mRNA; cDNA DKFZp686O15166 (from clone DKFZp686O15166) PA
BC070050.1 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:30340453), partial cds PA
NM_016333.3 Homo sapiens serine/arginine repetitive matrix 2 (SRRM2), mRNA PA
AF201422.1 Homo sapiens splicing coactivator subunit SRm300 (SRM300) mRNA, complete cds PA
AK025579.1 Homo sapiens cDNA: FLJ21926 fis, clone HEP04142, highly similar to AB016092 Homo sapiens mRNA for RNA binding protein PA
AK025903.1 Homo sapiens cDNA: FLJ22250 fis, clone HRC02675, highly similar to AB016092 Homo sapiens mRNA for RNA binding protein PA
BC107087.2 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:40014497), partial cds P
BC009062.1 Homo sapiens, clone IMAGE:3875076, mRNA, partial cds PA
BC028054.1 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:4999979) PA
BC020639.1 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:4733822), partial cds PA
BC007752.2 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:4110278), partial cds PA
AF161338.1 Homo sapiens HSPC075 mRNA, partial cds P
AB016090.1 Homo sapiens mRNA for RNA binding protein, partial cds, clone: R83 P
AB016089.1 Homo sapiens mRNA for RNA binding protein, partial cds, clone: R52 P
AB016088.1 Homo sapiens mRNA for RNA binding protein, partial cds, clone: R11 P
AB016087.1 Homo sapiens mRNA for RNA binding protein, partial cds, clone: R03 P
AB015644.1 Homo sapiens mRNA for RNA binding protein, partial cds P
X97301.1 H.sapiens mRNA for Ptg-11 protein
BC041155.1 Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:5576530), complete cds PA
AB002322.3 Homo sapiens mRNA for KIAA0324 protein, partial cds P

EST sequences (10 of 1850) [Show all sequences]

AA974383.1 Clone IMAGE:1586822 uncharacterized tissue 3' read
R15265.1 Clone IMAGE:29565 brain 5' read
AA995288.1 Clone IMAGE:1606580 kidney 3' read A
R20109.1 Clone IMAGE:32540 brain 5' read
AI141248.1 Clone IMAGE:1689759 mixed 3' read A
AI144276.1 Clone IMAGE:1704415 brain 3' read A
CB048301.1 Clone IMAGE:3270447 prostate 3' read A
CB048302.1 Clone IMAGE:3270447 prostate 5' read
BX109379.1 Clone IMAGp998B08363_;_IMAGE:191911 mixed P
BX105751.1 Clone IMAGp998J135834_;_IMAGE:2350956 intestine


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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