KH homology domain containing 1 (KHDC1)

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UGID:228564 UniGene Hs.433062 Homo sapiens (human) KHDC1

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KH homology domain containing 1 (KHDC1)

Human protein-coding gene KHDC1. Represented by 59 ESTs from 47 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 228564 - Hs.433062]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001238803.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	KHDC1 gene product	H. sapiens	100.0	236
Other hits (2 of 5) [Show all]		Species	Id(%)	Len(aa)
XP_001112189.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: KH homology domain-containing protein 1-like isoform 1	M. mulatta	98.8	163
NP_001162407.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	KH homology domain-containing protein 1	P. anubis	98.8	163

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; pharynx; mixed; blood; ovary; uncharacterized tissue; kidney; lung; cervix; spleen; thymus; liver; testis; placenta; skin; eye; bone; mammary gland; adrenal gland; prostate

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	6
Map position:	6q13
UniSTS entry:	Chr 6	RH12703	[Map Viewer]
UniSTS entry:	Chr 6	REN32332
UniSTS entry:	Chr 6	REN32152
UniSTS entry:	Chr 6	REN32331

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_030568.3	Homo sapiens KH homology domain containing 1 (KHDC1), transcript variant 2, mRNA	PA
BC022080.2	Homo sapiens KH homology domain containing 1, mRNA (cDNA clone MGC:33485 IMAGE:4813061), complete cds	PA
NM_001251874.1	Homo sapiens KH homology domain containing 1 (KHDC1), transcript variant 1, mRNA	PA

EST sequences (10 of 59) [Show all sequences]

R17461.1	Clone IMAGE:32123	brain	5' read
BX098001.1	Clone IMAGp998G07153_;_IMAGE:32123	brain		PA
AI205972.1	Clone IMAGE:1762231	kidney	3' read
AI277288.1	Clone IMAGE:1893816	placenta	3' read	A
AI084866.1	Clone IMAGE:1750267	brain	3' read
AI356768.1	Clone IMAGE:2012802	brain	3' read
AI375458.1	Clone IMAGE:2065635	embryonic tissue	3' read	PA
R42808.1	Clone IMAGE:32123	brain	3' read	A
R40276.1	Clone IMAGE:28893	brain	3' read	A
AL037414.2	Clone DKFZp564M1071	brain	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria