> Ribosomal protein L36a (RPL36A)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:228233     UniGene Hs.432485     Homo sapiens (human)   RPL36A Order cDNA clone, Links
Ribosomal protein L36a (RPL36A)

Human protein-coding gene RPL36A. Represented by 1776 ESTs from 451 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 228233 - Hs.432485]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001093862.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1 M. mulatta 100.0 448
NP_001233423.1 HNRNPH2 gene product P. troglodytes 100.0 448
NP_001027565.1 HNRNPH2 gene product H. sapiens 100.0 448
XP_862053.2 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 7 C. lupus familiaris 100.0 448
XP_001493828.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 E. caballus 100.0 448
XP_004022538.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 O. aries 100.0 448
XP_002713068.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 O. cuniculus 100.0 448
NP_001187060.1 60S ribosomal protein L36a I. punctatus 100.0 105
NP_063921.1 heterogeneous nuclear ribonucleoprotein H2 M. musculus 99.8 448
NP_001014041.1 Hnrnph2 gene product R. norvegicus 99.8 448
NP_001069476.1 HNRNPH2 gene product B. taurus 99.8 448
NP_001086923.1 heterogeneous nuclear ribonucleoprotein H1 (H) X. laevis 88.8 454
NP_997754.1 hnrnph1l gene product D. rerio 85.9 405
NP_496375.1 Protein RPL-41 C. elegans 79.0 104
NP_609179.2 ribosomal protein L36A D. melanogaster 76.0 103
XP_001691337.1 ribosomal protein L36a, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 75.8 98
NP_188981.1 60S ribosomal protein L36a A. thaliana 74.8 103
NP_012010.1 ribosomal 60S subunit protein L42B S. cerevisiae 74.5 105
XP_964540.2 60S ribosomal protein L42 N. crassa 74.5 105
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_001369385.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H M. domestica 98.0 448
XP_003123691.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H S. scrofa 98.0 448

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; mixed; prostate; embryonic tissue; testis; uterus; uncharacterized tissue; liver; mammary gland; intestine; skin; lung; pancreas; blood; eye; spleen; placenta; stomach; muscle; connective tissue; vascular; thymus; heart; bone marrow; pharynx; ear; adrenal gland; bladder; mouth; ovary; bone; trachea; pituitary gland; thyroid; ascites; cervix; parathyroid; lymph node; esophagus; salivary gland; umbilical cord; lymph; nerve; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22.1
UniSTS entry: Chr 15 D15S1179
UniSTS entry: Chr X STS-AA037456
UniSTS entry: Chr X Hnrph2
UniSTS entry: Chr X RP_L36A_1 [Map Viewer]
UniSTS entry: Chr 1 RPL36A
UniSTS entry: Chr 1 D15S1477
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BC062219.1 Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:72020 IMAGE:6726961), complete cds PA
BC070204.1 Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:88185 IMAGE:4774945), complete cds PA
NM_019597.4 Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2), transcript variant 1, mRNA PA
NM_001032393.2 Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2), transcript variant 2, mRNA PA
NM_021029.5 Homo sapiens ribosomal protein L36a (RPL36A), transcript variant 1, mRNA PA
BC001781.1 Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:2064 IMAGE:3353669), complete cds PA
AY927233.1 Homo sapiens cell growth-inhibiting protein 15 mRNA, complete cds P
BC130343.1 Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H'), mRNA (cDNA clone MGC:163215 IMAGE:40146374), complete cds P
BC130345.1 Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H'), mRNA (cDNA clone MGC:163217 IMAGE:40146376), complete cds P
BC031015.1 Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:32772 IMAGE:4659712), complete cds PA
AK096711.1 Homo sapiens cDNA FLJ39392 fis, clone PLACE6006042, moderately similar to 60S RIBOSOMAL PROTEIN L44
AK294144.1 Homo sapiens cDNA FLJ57964 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein H' P
AK298133.1 Homo sapiens cDNA FLJ58205 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein H' P
BC030103.2 Homo sapiens cDNA clone IMAGE:4796797 A
U01923.1 Human BTK region clone ftp-3 mRNA P
NM_001199974.1 Homo sapiens RPL36A-HNRNPH2 readthrough (RPL36A-HNRNPH2), transcript variant 2, mRNA PA
NM_001199973.1 Homo sapiens RPL36A-HNRNPH2 readthrough (RPL36A-HNRNPH2), transcript variant 1, mRNA PA
NM_001199972.1 Homo sapiens ribosomal protein L36a (RPL36A), transcript variant 2, mRNA

EST sequences (10 of 1776) [Show all sequences]

AA948734.1 Clone IMAGE:1374793 ovary P
AA985675.1 Clone IMAGE:1601320 lung 3' read P
AA988304.1 Clone IMAGE:1607038 mammary gland 3' read A
AA994661.1 Clone IMAGE:1630811 mammary gland 3' read A
R17848.1 Clone IMAGE:31991 brain 5' read P
AI016129.1 Clone IMAGE:1618725 testis 3' read A
AI075369.1 Clone IMAGE:1682139 skin 3' read PA
AI091834.1 Clone IMAGE:1690953 mixed 3' read
T06265.1 Clone HFBDR08 brain
CB048482.1 Clone IMAGE:3270840 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help