> Tetraspanin 6 (TSPAN6)
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UGID:137045     UniGene Hs.43233     Homo sapiens (human)   TSPAN6 Order cDNA clone, Links
Tetraspanin 6 (TSPAN6)

Human protein-coding gene TSPAN6. Represented by 616 ESTs from 244 cDNA libraries. Corresponds to reference sequence NM_003270.2. [UniGene 137045 - Hs.43233]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_529071.3 PREDICTED: tetraspanin-6 P. troglodytes 100.0 244
NP_003261.1 TSPAN6 gene product H. sapiens 100.0 244
NP_062630.2 Tspan6 gene product M. musculus 95.9 244
NP_001124290.1 tetraspanin-7 D. rerio 65.7 247
NP_001080292.1 tetraspanin 7 X. laevis 65.7 247
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001492387.1 PREDICTED: tetraspanin-6-like E. caballus 98.0 244
NP_001230990.1 TSPAN6 gene product S. scrofa 98.0 244

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; embryonic tissue; uterus; kidney; lung; mixed; uncharacterized tissue; parathyroid; bone marrow; cervix; prostate; thyroid; placenta; eye; umbilical cord; trachea; skin; intestine; adrenal gland; salivary gland; stomach; bladder; liver; ovary; pituitary gland; pharynx; mammary gland; connective tissue; esophagus; heart; muscle; vascular; thymus; bone; ascites; mouth; nerve; pancreas; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22
UniSTS entry: Chr X DXS8329 [Map Viewer]
UniSTS entry: Chr X RH76329
UniSTS entry: Chr X TM4SF6__5271
UniSTS entry: PMC92356P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

U84895.1 Human transmembrane 4 superfamily A15 homolog mRNA, complete cds P
BT006977.1 Homo sapiens transmembrane 4 superfamily member 6 mRNA, complete cds P
AB097016.1 Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 321 P
AY358825.1 Homo sapiens clone DNA19902 T245 (UNQ767) mRNA, complete cds P
NM_003270.2 Homo sapiens tetraspanin 6 (TSPAN6), mRNA P
CR457115.1 Homo sapiens full open reading frame cDNA clone RZPDo834G087D for gene TM4SF6, transmembrane 4 superfamily member 6; complete cds, incl. stopcodon P
AF133426.1 Homo sapiens tetraspanin TM4-D mRNA, complete cds P
AB209876.1 Homo sapiens mRNA for transmembrane 4 superfamily member 6 variant protein P
BC012389.1 Homo sapiens tetraspanin 6, mRNA (cDNA clone MGC:9097 IMAGE:3857537), complete cds PA
AK315773.1 Homo sapiens cDNA, FLJ96887 P
AK309581.1 Homo sapiens cDNA, FLJ99622 P
AK300852.1 Homo sapiens cDNA FLJ52167 complete cds, highly similar to Tetraspanin-6 P
AK299176.1 Homo sapiens cDNA FLJ50175 complete cds, highly similar to Tetraspanin-6 P
AK075072.1 Homo sapiens cDNA FLJ90591 fis, clone PLACE1001081, highly similar to Tetraspanin-6 P
AF043906.1 Homo sapiens T245 protein (T245) mRNA, complete cds P
AF053453.1 Homo sapiens tetraspan TM4SF (TSPAN-6) mRNA, complete cds PA

EST sequences (10 of 616) [Show all sequences]

R14564.1 Clone IMAGE:28768 brain 5' read P
R17172.1 Clone IMAGE:31710 brain 5' read P
R17252.1 Clone IMAGE:31854 brain 5' read P
AI018660.1 Clone IMAGE:1642199 testis 3' read PA
AI041007.1 Clone IMAGE:1642538 testis 3' read A
AI042623.1 Clone IMAGE:1668137 parathyroid 3' read A
AI095771.1 Clone IMAGE:1697774 uterus 3' read
AI086204.1 Clone IMAGE:1654098 mixed 3' read
AI123370.1 Clone IMAGE:1683531 parathyroid 3' read A
BX104918.1 Clone IMAGp998C0184_;_IMAGE:110136 mixed P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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