Homeobox D11 (HOXD11)

Restricted Expression:

juvenile [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

brain; mixed; uncharacterized tissue; placenta; uterus; embryonic tissue; prostate; cervix; kidney; bone

NCBI

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UGID:224372 UniGene Hs.421136 Homo sapiens (human) HOXD11

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Homeobox D11 (HOXD11)

Human protein-coding gene HOXD11. Represented by 29 ESTs from 20 cDNA libraries. EST representation biased toward juvenile. Corresponds to reference sequence NM_021192.2. [UniGene 224372 - Hs.421136]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_067015.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	HOXD11 gene product	H. sapiens	100.0	337
NP_032299.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Hoxd11 gene product	M. musculus	94.3	335
NP_001089966.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	homeobox D11	X. laevis	69.7	273
NP_571242.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	hoxd11a gene product	D. rerio	63.4	275
Other hits (2 of 21) [Show all]		Species	Id(%)	Len(aa)
XP_515927.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein LOC459761	P. troglodytes	98.8	338
XP_852429.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: homeobox protein Hox-D11	C. lupus familiaris	96.8	339

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2
Map position:	2q31.1
UniSTS entry:	Chr 2	HOXD11_2590

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_021192.2	Homo sapiens homeobox D11 (HOXD11), mRNA	P
BC109394.1	Homo sapiens homeobox D11, mRNA (cDNA clone IMAGE:40068657), complete cds	P
AK309681.1	Homo sapiens cDNA, FLJ99722	P

EST sequences (10 of 29) [Show all sequences]

AI095929.1	Clone IMAGE:1696919	uterus	3' read	P
AI139039.1	Clone IMAGE:1710375	uterus	3' read	P
BX117343.1	Clone IMAGp998E101866_;_IMAGE:758769	embryonic tissue
CB151522.1	Clone C1SNU17-33-G01	cervix	5' read
AI277208.1	Clone IMAGE:1893687	placenta	3' read	P
AW194680.1	Clone IMAGE:2577653	kidney	3' read	A
AW206798.1	Clone IMAGE:2722820	mixed	3' read	P
AW630600.1	Clone IMAGE:2969253	mixed	5' read
AW971290.1		uncharacterized tissue		A
BE260674.1	Clone IMAGE:3510235	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria