> Ribosomal protein L23a (RPL23A)
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UGID:223960     UniGene Hs.419463     Homo sapiens (human)   RPL23A Order cDNA clone, Links
Ribosomal protein L23a (RPL23A)

Human protein-coding gene RPL23A. Represented by 4281 ESTs from 523 cDNA libraries. Corresponds to reference sequence NM_000984.5. [UniGene 223960 - Hs.419463]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_004007804.1 PREDICTED: 60S ribosomal protein L23a-like O. aries 100.0 157
NP_997406.1 Rpl23a gene product M. musculus 100.0 155
NP_001101753.1 Rpl23a gene product R. norvegicus 100.0 155
XP_001095173.1 PREDICTED: 60S ribosomal protein L23a-like isoform 1 M. mulatta 100.0 155
XP_003902943.1 PREDICTED: 60S ribosomal protein L23a-like P. anubis 100.0 155
XP_001159035.1 PREDICTED: 60S ribosomal protein L23a-like P. troglodytes 100.0 155
NP_000975.2 RPL23A gene product H. sapiens 100.0 155
XP_535387.2 PREDICTED: 60S ribosomal protein L23a-like C. lupus familiaris 100.0 155
XP_001499298.1 PREDICTED: 60S ribosomal protein L23a-like E. caballus 100.0 155
XP_003131820.1 PREDICTED: 60S ribosomal protein L23a-like S. scrofa 100.0 155
NP_001039423.1 RPL23A gene product B. taurus 100.0 155
XP_002709804.1 PREDICTED: ribosomal protein L23a-like O. cuniculus 100.0 155
NP_001232640.1 LOC100190675 gene product T. guttata 100.0 154
XP_415820.3 PREDICTED: 60S ribosomal protein L23a G. gallus 100.0 154
XP_001375997.2 PREDICTED: 60S ribosomal protein L23a-like M. domestica 100.0 153
XP_003214156.1 PREDICTED: 60S ribosomal protein L23a-like, partial M. gallopavo 100.0 145
NP_001087299.1 60S ribosomal protein L23a X. laevis 98.1 154
NP_001001593.1 rpl23a gene product D. rerio 97.4 154
NP_001078293.1 60S ribosomal protein L23a-2 A. thaliana 80.4 152
XP_001695451.1 ribosomal protein L23a, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 74.2 146
NP_492263.1 Protein RPL-25.2 C. elegans 71.7 144
XP_963077.1 60S ribosomal protein L25 N. crassa 69.9 155
NP_523886.1 ribosomal protein L23A D. melanogaster 68.5 218
NP_014514.1 ribosomal 60S subunit protein L25 S. cerevisiae 65.5 141
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_003230678.1 PREDICTED: 60S ribosomal protein L23a-like A. carolinensis 99.3 154
XP_004076433.1 PREDICTED: 60S ribosomal protein L23a-like O. latipes 99.3 154

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; embryonic tissue; mixed; eye; tonsil; prostate; skin; connective tissue; brain; uterus; uncharacterized tissue; liver; pancreas; intestine; placenta; muscle; testis; ascites; blood; kidney; ovary; lymph; mammary gland; lymph node; heart; parathyroid; stomach; bone marrow; bone; vascular; ear; spleen; adrenal gland; pharynx; pituitary gland; thymus; bladder; umbilical cord; cervix; salivary gland; mouth; adipose tissue; nerve; thyroid; pineal gland; trachea; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q11.2
UniSTS entry: Chr 3 RH47143
UniSTS entry: Chr 17 RH66779
UniSTS entry: Chr 17 RH78645
UniSTS entry: Chr 17 RH68413
UniSTS entry: Chr 17 G28287
UniSTS entry: Chr 5 REN95794
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 16 REN95795
UniSTS entry: Chr 17 D10S2200
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK130965.1 Homo sapiens cDNA FLJ27455 fis, clone UBA04121, highly similar to 60S ribosomal protein L23a P
BC058041.1 Homo sapiens ribosomal protein L23a, mRNA (cDNA clone MGC:61848 IMAGE:6716166), complete cds PA
NM_000984.5 Homo sapiens ribosomal protein L23a (RPL23A), mRNA PA
BC070191.1 Homo sapiens cDNA clone IMAGE:6715798, partial cds A
U02032.1 Human ribosomal protein L23a mRNA, partial cds P
BC014459.1 Homo sapiens ribosomal protein L23a, mRNA (cDNA clone MGC:23063 IMAGE:4872948), complete cds PA
U43701.1 Human ribosomal protein L23a mRNA, complete cds P
AK312123.1 Homo sapiens cDNA, FLJ92405, Homo sapiens ribosomal protein L23a (RPL23A), mRNA P
U37230.1 Human ribosomal protein L23a mRNA, complete cds PA
L13799.1 Homo sapiens (clone 01) liver expressed protein mRNA, 3'end P

EST sequences (10 of 4281) [Show all sequences]

AA960984.1 Clone IMAGE:1569722 lung 3' read P
AA866084.1 Clone IMAGE:1459546 kidney 3' read PA
AA947945.1 Clone IMAGE:1416007 lung 3' read P
AA961525.1 Clone IMAGE:1592543 kidney 3' read P
AA968797.1 Clone IMAGE:1593702 kidney 3' read P
AA969831.1 Clone IMAGE:1575768 intestine 3' read PA
AA973751.1 Clone IMAGE:1586480 uncharacterized tissue 3' read P
AA977953.1 Clone IMAGE:1592340 kidney 3' read
AA987630.1 Clone IMAGE:1603399 lung 3' read P
AA988122.1 Clone IMAGE:1604650 lung 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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