S100 calcium binding protein A11 (S100A11)

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UGID:223213 UniGene Hs.417004 Homo sapiens (human) S100A11

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S100 calcium binding protein A11 (S100A11)

Human protein-coding gene S100A11. Represented by 1071 ESTs from 371 cDNA libraries. Corresponds to reference sequence NM_005620.1. [UniGene 223213 - Hs.417004]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_003339045.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein S100-A11	P. troglodytes	100.0	104
NP_005611.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	S100A11 gene product	H. sapiens	100.0	104
XP_001381433.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: e3 ubiquitin-protein ligase RNF19B-like	M. domestica	100.0	80
XP_003228790.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: e3 ubiquitin-protein ligase RNF19B-like	A. carolinensis	100.0	80
NP_058020.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	S100a11 gene product	M. musculus	90.7	97
XP_686250.4 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: e3 ubiquitin-protein ligase RNF19A-like	D. rerio	85.2	81
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_001108718.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein S100-A11-like	M. mulatta	99.0	104
XP_003892674.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein S100-A11-like isoform 1	P. anubis	99.0	104

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	lung; embryonic tissue; mixed; mammary gland; intestine; placenta; uterus; pancreas; skin; uncharacterized tissue; prostate; kidney; ovary; heart; stomach; bladder; larynx; ascites; salivary gland; blood; eye; brain; muscle; pharynx; umbilical cord; vascular; testis; parathyroid; liver; mouth; lymph node; bone; amniotic fluid; bone marrow; cervix; connective tissue; tonsil; spleen; thyroid; adrenal gland; pineal gland; adipose tissue; esophagus; lymph

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1q21
UniSTS entry:	Chr 1	RH91450
UniSTS entry:	Chr 1	RH17442

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT009912.1	Homo sapiens S100 calcium binding protein A11 (calgizzarin) mRNA, complete cds	P
NM_005620.1	Homo sapiens S100 calcium binding protein A11 (S100A11), mRNA	P
D38583.1	Homo sapiens mRNA for calgizzarin, complete cds	P
X80201.1	H.sapiens MLN70 mRNA	P
D49355.1	Homo sapiens mRNA for S100C protein, complete cds	P
BC001410.2	Homo sapiens S100 calcium binding protein A11, mRNA (cDNA clone MGC:2149 IMAGE:3140092), complete cds	PA
BC014354.1	Homo sapiens S100 calcium binding protein A11, mRNA (cDNA clone MGC:24205 IMAGE:3685742), complete cds	PA
AK312184.1	Homo sapiens cDNA, FLJ92471, highly similar to Homo sapiens S100 calcium binding protein A11 (calgizzarin) (S100A11), mRNA	P
D50374.1	Homo sapiens mRNA for calcium binding protein, complete cds	P

EST sequences (10 of 1071) [Show all sequences]

AA989585.1	Clone IMAGE:1576922	spleen	3' read	PA
AA992734.1	Clone IMAGE:1623455	embryonic tissue	3' read	P
R16768.1	Clone IMAGE:128793	mixed	3' read	PA
AI000019.1	Clone IMAGE:1613769	uncharacterized tissue	3' read	PA
AA834084.1	Clone IMAGE:1422229	kidney		P
AA910395.1	Clone IMAGE:1521130	lung	3' read	PA
AI015045.1	Clone IMAGE:1640824	testis	3' read	PA
AI015737.1	Clone IMAGE:1622222	embryonic tissue	3' read	PA
AI018461.1	Clone IMAGE:1641994	testis	3' read	PA
AI025397.1	Clone IMAGE:1648073	parathyroid	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria