> Transcription factor 25 (basic helix-loop-helix) (TCF25)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:222731     UniGene Hs.415342     Homo sapiens (human)   TCF25 Order cDNA clone, Links
Transcription factor 25 (basic helix-loop-helix) (TCF25)

Human protein-coding gene TCF25. Represented by 761 ESTs from 328 cDNA libraries. Corresponds to reference sequence NM_014972.2. [UniGene 222731 - Hs.415342]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055787.1 TCF25 gene product H. sapiens 100.0 675
XP_511180.4 PREDICTED: transcription factor 25 P. troglodytes 99.7 626
NP_001032967.1 Tcf25 gene product M. musculus 95.7 675
NP_001091405.1 transcription factor 25 (basic helix-loop-helix) X. laevis 73.2 674
NP_001005399.1 tcf25 gene product D. rerio 70.0 649
NP_648174.3 CG7927, isoform A D. melanogaster 50.5 400
XP_001698762.1 hypothetical protein CHLREDRAFT_151877 C. reinhardtii 47.9 163
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_003917392.1 PREDICTED: transcription factor 25 P. anubis 98.1 675
XP_001090795.1 PREDICTED: transcription factor 25 isoform 3 M. mulatta 97.8 675

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; lung; uncharacterized tissue; mixed; intestine; embryonic tissue; pituitary gland; eye; lymph node; uterus; prostate; thyroid; spleen; esophagus; adipose tissue; skin; mammary gland; liver; cervix; pancreas; blood; kidney; lymph; amniotic fluid; mouth; ovary; bone marrow; bladder; larynx; ascites; connective tissue; muscle; thymus; heart; pineal gland; nerve; ganglia; bone; stomach; salivary gland; tonsil; ear; vascular; parathyroid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q24.3
UniSTS entry: Chr 16 RH80305
UniSTS entry: Chr 16 MARC_52624-52625:1146768114:1
UniSTS entry: Chr 16 MARC_52622-52623:1146767377:1
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AB028972.1 Homo sapiens mRNA for KIAA1049 protein, partial cds P
AK127949.1 Homo sapiens cDNA FLJ46059 fis, clone TBAES2003435 P
AK024679.1 Homo sapiens cDNA: FLJ21026 fis, clone CAE06812 PA
DQ321703.1 Homo sapiens NULP1 (NULP1) mRNA, complete cds P
BC000959.1 Homo sapiens transcription factor 25 (basic helix-loop-helix), mRNA (cDNA clone MGC:5379 IMAGE:3445789), complete cds PA
NM_014972.2 Homo sapiens transcription factor 25 (basic helix-loop-helix) (TCF25), mRNA PA
BC009349.2 Homo sapiens transcription factor 25 (basic helix-loop-helix), mRNA (cDNA clone MGC:14951 IMAGE:4136178), complete cds PA
BC011884.2 Homo sapiens transcription factor 25 (basic helix-loop-helix), mRNA (cDNA clone MGC:19865 IMAGE:3678670), complete cds PA
AK095785.1 Homo sapiens cDNA FLJ38466 fis, clone FEBRA2021550, moderately similar to Mus musculus Nulp1 (nulp1) mRNA P
AK301053.1 Homo sapiens cDNA FLJ59999 complete cds, highly similar to Transcription factor 25 P
AF322111.1 Homo sapiens FKSG26 mRNA, complete cds P
AF130092.1 Homo sapiens clone FLB9715 PRO2620 mRNA, complete cds PA

EST sequences (10 of 761) [Show all sequences]

AA954325.1 Clone IMAGE:1563042 mixed 3' read
AA954327.1 Clone IMAGE:1563046 mixed 3' read
AA905962.1 Clone IMAGE:1505448 mixed 3' read
AA922723.1 Clone IMAGE:1474431 intestine 3' read P
AA923051.1 Clone IMAGE:1520452 kidney 3' read
AI014343.1 Clone IMAGE:1539113 brain 3' read P
AI034448.1 Clone IMAGE:1647744 parathyroid 3' read PA
AI042046.1 Clone IMAGE:1660704 mixed 3' read P
AI055817.1 Clone IMAGE:1750222 brain 3' read P
AI078481.1 Clone IMAGE:1675247 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help