> ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5)
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UGID:222682     UniGene Hs.415117     Homo sapiens (human)   ST3GAL5 Order cDNA clone, Links
ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5)

Human protein-coding gene ST3GAL5. Represented by 332 ESTs from 161 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 222682 - Hs.415117]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003887.3 ST3GAL5 gene product H. sapiens 100.0 417
NP_001030305.1 St3gal5 gene product M. musculus 89.8 413
NP_955810.2 st3gal5 gene product D. rerio 51.4 317
NP_001177325.1 st3Gal-III protein X. laevis 46.6 193
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
NP_001032378.1 ST3GAL5 gene product P. troglodytes 99.5 361
XP_001090769.2 PREDICTED: lactosylceramide alpha-2,3-sialyltransferase isoform 6 M. mulatta 99.0 417

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lymph node; heart; uncharacterized tissue; mixed; mammary gland; stomach; lung; adrenal gland; thyroid; pituitary gland; thymus; embryonic tissue; liver; kidney; skin; blood; eye; placenta; bone; pancreas; muscle; intestine; uterus; parathyroid; spleen; adipose tissue; trachea; prostate; bone marrow; vascular; connective tissue; pineal gland; esophagus; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2p11.2
UniSTS entry: Chr 2 STS-W56550
UniSTS entry: Chr 2 SIAT9__5414
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 GDB:631802
UniSTS entry: RH78024
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AB018356.1 Homo sapiens mRNA for GM3 synthase, complete cds P
AF105026.1 Homo sapiens CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase (ST3GalV) mRNA, complete cds PA
AK127346.1 Homo sapiens cDNA FLJ45418 fis, clone BRHIP3035006, highly similar to Homo sapiens sialyltransferase 9 (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase; GM3 synthase) (SIAT9) P
AK124862.1 Homo sapiens cDNA FLJ42872 fis, clone BRHIP2024165, moderately similar to Homo sapiens sialyltransferase 9 (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase; GM3 synthase) (SIAT9) P
AY152815.2 Homo sapiens GM3 synthase (SIAT9) mRNA, complete cds PA
AY359105.1 Homo sapiens clone DNA96897 GM3 synthase (UNQ2510) mRNA, complete cds P
NM_003896.3 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5), transcript variant 1, mRNA P
BC065936.1 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5, mRNA (cDNA clone MGC:74435 IMAGE:6163586), complete cds PA
AK001340.1 Homo sapiens cDNA FLJ10478 fis, clone NT2RP2000114, highly similar to Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5, transcript variant 1, mRNA P
AF119415.1 Homo sapiens GM3 synthase mRNA, complete cds PA
AF119418.1 Homo sapiens nonfunctional GM3 synthase mRNA, alternatively spliced, complete sequence PA
NM_001042437.1 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5), transcript variant 2, mRNA PA
BC009887.2 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5, mRNA (cDNA clone IMAGE:4025692) A
AF344832.1 Homo sapiens GM3 synthase isoform STFB2 (SIAT9) mRNA, 5' UTR sequence, alternatively spliced
AF344831.1 Homo sapiens GM3 synthase isoform STFB1 (SIAT9) mRNA, 5' UTR sequence, alternatively spliced
AF161396.1 Homo sapiens HSPC278 mRNA, partial cds P
AK315955.1 Homo sapiens cDNA, FLJ78854 complete cds, highly similar to Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5, transcript variant 1, mRNA P
AK295252.1 Homo sapiens cDNA FLJ55056 complete cds, highly similar to Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5, transcript variant 1, mRNA P

EST sequences (10 of 332) [Show all sequences]

AA969297.1 Clone IMAGE:1580425 mixed 3' read A
R18785.1 Clone IMAGE:27119 brain 5' read
AI038475.1 Clone IMAGE:1647854 parathyroid 3' read
AA928319.1 Clone IMAGE:1553083 uncharacterized tissue 3' read A
AI089834.1 Clone IMAGE:1687284 brain 3' read
AI123263.1 Clone IMAGE:1689945 mixed 3' read
CB044188.1 Clone IMAGE:3217450 intestine 5' read P
CB053451.1 Clone IMAGE:3290925 uncharacterized tissue 3' read A
CB053452.1 Clone IMAGE:3290925 uncharacterized tissue 5' read P
AI150920.1 Clone IMAGE:1703800 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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