> Polycystic kidney disease 1-like 2 (PKD1L2)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:222299     UniGene Hs.413525     Homo sapiens (human)   PKD1L2 Links
Polycystic kidney disease 1-like 2 (PKD1L2)

Human protein-coding gene PKD1L2. Represented by 39 ESTs from 24 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 222299 - Hs.413525]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_443124.3 PKD1L2 gene product H. sapiens 100.0 2458
NP_083962.4 Pkd1l2 gene product M. musculus 77.1 2458
XP_002662959.1 PREDICTED: im:7138475 D. rerio 53.8 1646
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_511127.4 PREDICTED: LOW QUALITY PROTEIN: polycystic kidney disease 1-like 2 P. troglodytes 96.5 2466
XP_003917275.1 PREDICTED: polycystic kidney disease protein 1-like 2 P. anubis 93.5 2465

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; prostate; kidney; lung; testis; placenta; uterus; mammary gland; lymph node; skin; embryonic tissue; pancreas; adipose tissue; eye; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q23.2
UniSTS entry: Chr 1 L17709
UniSTS entry: Chr 1 D3S1673
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D15S1477
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AY164483.1 Homo sapiens polycystic kidney disease 1-like 2 (PKD1L2) mRNA, complete cds P
NM_052892.3 Homo sapiens polycystic kidney disease 1-like 2 (PKD1L2), transcript variant 1, mRNA P
AY371495.1 Homo sapiens polycystic kidney disease 1-like 2 short form (PKD1L2) mRNA, complete cds; alternatively spliced PA
AK127266.1 Homo sapiens cDNA FLJ45333 fis, clone BRHIP3007291 P
AK131378.1 Homo sapiens cDNA FLJ16437 fis, clone BRAMY2019111, weakly similar to POLYCYSTIN 2 P
CR627341.1 Homo sapiens mRNA; cDNA DKFZp686J19100 (from clone DKFZp686J19100) PA
NM_001076780.1 Homo sapiens polycystic kidney disease 1-like 2 (PKD1L2), transcript variant 3, mRNA P
BC014157.2 Homo sapiens polycystic kidney disease 1-like 2, mRNA (cDNA clone IMAGE:4423137), complete cds PA
AK098052.1 Homo sapiens cDNA FLJ40733 fis, clone TKIDN2003059 P
AL832135.1 Homo sapiens mRNA; cDNA DKFZp686J2110 (from clone DKFZp686J2110) PA
BC004562.2 Homo sapiens polycystic kidney disease 1-like 2, mRNA (cDNA clone IMAGE:4026358), complete cds PA

EST sequences (10 of 39) [Show all sequences]

BX115637.1 Clone IMAGp998O055708_;_IMAGE:2303836 uncharacterized tissue A
CB266350.1 adipose tissue 5' read
AI825072.1 Clone IMAGE:2303836 uncharacterized tissue 3' read A
CD643343.1 Clone IMAGE:30426554 embryonic tissue 5' read
AW082870.1 Clone IMAGE:2581773 mixed 3' read A
CN284126.1 embryonic tissue 5' read
CV030117.1 mixed 5' read P
BE503919.1 Clone IMAGE:3210012 uncharacterized tissue 3' read A
BF125457.1 Clone IMAGE:4026358 skin 5' read P
DA312294.1 Clone BRHIP3001270 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help