> Nuclear transcription factor, X-box binding 1 (NFX1)
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UGID:222172     UniGene Hs.413074     Homo sapiens (human)   NFX1 Order cDNA clone, Links
Nuclear transcription factor, X-box binding 1 (NFX1)

Human protein-coding gene NFX1. Represented by 502 ESTs from 221 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 222172 - Hs.413074]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001159552.2 PREDICTED: transcriptional repressor NF-X1 isoform 4 P. troglodytes 100.0 1119
NP_002495.2 NFX1 gene product H. sapiens 100.0 1119
NP_076228.2 Nfx1 gene product M. musculus 93.6 1113
XP_690559.3 PREDICTED: transcriptional repressor NF-X1-like D. rerio 71.3 783
NP_476598.1 shuttle craft, isoform A D. melanogaster 53.5 601
NP_498394.1 Protein NFX-1 C. elegans 50.9 552
NP_172488.1 NF-X1-type zinc finger protein NFXL1 A. thaliana 46.4 222
XP_001703384.1 predicted protein C. reinhardtii 45.4 174
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
XP_003911651.1 PREDICTED: transcriptional repressor NF-X1 P. anubis 99.3 1119
XP_002800128.1 PREDICTED: transcriptional repressor NF-X1-like M. mulatta 97.3 1169

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; ovary; pharynx; intestine; thyroid; liver; larynx; uncharacterized tissue; lung; prostate; mixed; kidney; cervix; blood; esophagus; vascular; trachea; placenta; mouth; uterus; thymus; bone marrow; spleen; embryonic tissue; skin; eye; lymph node; connective tissue; mammary gland; stomach; pancreas; bone; nerve; lymph; parathyroid; ascites; heart; muscle; adipose tissue; ganglia; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p13.3
UniSTS entry: Chr 9 RH35865
UniSTS entry: Chr 9 WI-22028
UniSTS entry: Chr 9 STS-AA037854
UniSTS entry: D9S1052E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX647337.1 Homo sapiens mRNA; cDNA DKFZp779G2416 (from clone DKFZp779G2416) PA
NM_002504.4 Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 1, mRNA PA
AK225750.1 Homo sapiens mRNA for nuclear transcription factor, X-box binding 1 isoform 3 variant, clone: FCC135G01 PA
AF332009.1 Homo sapiens nuclear transcription factor NFX2 (NFX2) mRNA, complete cds PA
BC012151.1 Homo sapiens nuclear transcription factor, X-box binding 1, mRNA (cDNA clone MGC:20369 IMAGE:4558442), complete cds PA
AK291643.1 Homo sapiens cDNA FLJ78663 complete cds, highly similar to Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 2, mRNA P
AL832342.1 Homo sapiens mRNA; cDNA DKFZp451N035 (from clone DKFZp451N035) PA
NM_147134.2 Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 3, mRNA P
NM_147133.2 Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 2, mRNA P
BC006447.1 Homo sapiens nuclear transcription factor, X-box binding 1, mRNA (cDNA clone IMAGE:3636513), partial cds PA
U15306.1 Human cysteine-rich sequence-specific DNA-binding protein NFX1 mRNA, complete cds P

EST sequences (10 of 502) [Show all sequences]

AA905447.1 Clone IMAGE:1506199 mixed 3' read A
CB052044.1 Clone IMAGE:3290200 uncharacterized tissue 5' read A
CB052043.1 Clone IMAGE:3290200 uncharacterized tissue 3' read A
BX095525.1 Clone IMAGp998J1818_;_IMAGE:66545 mixed
BX090502.1 Clone IMAGp998F03791_;_IMAGE:345986 heart A
AI205069.1 Clone IMAGE:1684644 brain 3' read
CB152141.1 Clone B1T694954-18-H05 brain 5' read P
CB149297.1 Clone L15CKK1-44-E05 liver 5' read P
AA905906.1 Clone IMAGE:1505378 mixed 3' read A
AI198360.1 Clone IMAGE:1861076 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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