> Transgelin (TAGLN)
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UGID:221699     UniGene Hs.410977     Homo sapiens (human)   TAGLN Order cDNA clone, Links
Transgelin (TAGLN)

Human protein-coding gene TAGLN. Represented by 1970 ESTs from 413 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 221699 - Hs.410977]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003910795.1 PREDICTED: transgelin isoform 1 P. anubis 100.0 200
XP_003313366.1 PREDICTED: transgelin isoform 1 P. troglodytes 100.0 200
NP_003177.2 TAGLN gene product H. sapiens 100.0 200
NP_001231079.1 TAGLN gene product S. scrofa 100.0 200
NP_001103604.1 TAGLN gene product E. caballus 99.5 200
NP_001039614.1 TAGLN gene product B. taurus 99.5 200
XP_002708427.1 PREDICTED: transgelin O. cuniculus 99.5 200
NP_035656.1 Tagln gene product M. musculus 99.0 200
NP_001088510.1 uncharacterized protein LOC495380 X. laevis 82.6 200
NP_001038932.1 tagln gene product D. rerio 78.3 198
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_536561.2 PREDICTED: transgelin isoform 1 C. lupus familiaris 99.0 200
XP_001370893.1 PREDICTED: transgelin-like M. domestica 98.5 200

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; prostate; brain; lung; intestine; placenta; testis; uterus; eye; pancreas; skin; mixed; uncharacterized tissue; bone; mammary gland; bone marrow; connective tissue; ovary; stomach; nerve; kidney; heart; liver; vascular; pharynx; adrenal gland; umbilical cord; adipose tissue; amniotic fluid; thyroid; mouth; muscle; ganglia; pituitary gland; esophagus; spleen; larynx; bladder; ascites; lymph node; spinal cord; epididymis; pineal gland; blood; trachea; thymus; lymph; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23.2
UniSTS entry: Chr 11 MARC_7597-7598:996687993:1
UniSTS entry: Chr 11 Tagln
UniSTS entry: Chr 11 STS-M95787
UniSTS entry: Chr 11 MARC_7595-7596:996687990:1
UniSTS entry: Chr 11 D11S4428
UniSTS entry: Chr 11 RH47219
UniSTS entry: Chr 11 SHGC-34343 [Map Viewer]
UniSTS entry: Chr 11 RH18036
UniSTS entry: Chr 11 D11S4352 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BX640723.1 Homo sapiens mRNA; cDNA DKFZp686B01212 (from clone DKFZp686B01212) A
NM_003186.3 Homo sapiens transgelin (TAGLN), transcript variant 2, mRNA PA
BC065829.1 Homo sapiens transgelin, mRNA (cDNA clone MGC:75461 IMAGE:30399241), complete cds PA
NM_001001522.1 Homo sapiens transgelin (TAGLN), transcript variant 1, mRNA PA
CR536484.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0817D for gene TAGLN, transgelin; complete cds, incl. stopcodon P
CR541681.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0628D for gene TAGLN, transgelin; complete cds, without stopcodon P
BT019649.1 Homo sapiens transgelin mRNA, complete cds P
BT019648.1 Homo sapiens transgelin mRNA, complete cds P
AB209555.1 Homo sapiens mRNA for transgelin variant protein P
BC093050.1 Homo sapiens transgelin, mRNA (cDNA clone MGC:111120 IMAGE:30396619), complete cds PA
BC092415.1 Homo sapiens transgelin, mRNA (cDNA clone MGC:102939 IMAGE:30398731), complete cds PA
AK223002.1 Homo sapiens mRNA for transgelin variant, clone: HSI07764 PA
M95787.1 Human 22kDa smooth muscle protein (SM22) mRNA, complete cds P
BC004927.1 Homo sapiens transgelin, mRNA (cDNA clone MGC:10432 IMAGE:3625512), complete cds PA
BC010946.1 Homo sapiens transgelin, mRNA (cDNA clone IMAGE:4065231), complete cds A
AK314043.1 Homo sapiens cDNA, FLJ94704, highly similar to Homo sapiens transgelin (TAGLN), mRNA P
M83106.1 Human SM22 mRNA, 5' end P
D17409.1 Homo sapiens mRNA for SM22 alpha, complete cds P

EST sequences (10 of 1970) [Show all sequences]

AA983377.1 Clone IMAGE:1592752 kidney 3' read P
AA985492.1 Clone IMAGE:1592919 kidney 3' read
AI001181.1 Clone IMAGE:1637755 mammary gland 3' read
AI001182.1 Clone IMAGE:1637757 mammary gland 3' read
AI003737.1 Clone IMAGE:392031 pineal gland 3' read
AI016687.1 Clone IMAGE:1635663 kidney 3' read
AI017035.1 Clone IMAGE:1636022 kidney 3' read
AI025093.1 Clone IMAGE:1639786 testis 3' read
AI025583.1 Clone IMAGE:1644320 testis 3' read
AI066437.1 Clone IMAGE:1594405 intestine 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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