> Trichoplein, keratin filament binding (TCHP)
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UGID:221686     UniGene Hs.410924     Homo sapiens (human)   TCHP Order cDNA clone, Links
Trichoplein, keratin filament binding (TCHP)

Human protein-coding gene TCHP. Represented by 114 ESTs from 78 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 221686 - Hs.410924]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_115676.1 TCHP gene product H. sapiens 100.0 497
XP_509357.2 PREDICTED: trichoplein keratin filament-binding protein P. troglodytes 99.6 488
NP_084268.2 Tchp gene product M. musculus 80.7 496
NP_001082520.1 trichoplein keratin filament-binding protein X. laevis 62.7 498
NP_001035433.1 tchp gene product D. rerio 60.4 498
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_001116838.1 PREDICTED: trichoplein keratin filament-binding protein-like, partial M. mulatta 97.0 270
XP_003907192.1 PREDICTED: trichoplein keratin filament-binding protein P. anubis 94.1 475

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; brain; uncharacterized tissue; skin; mixed; lung; intestine; eye; cervix; parathyroid; muscle; embryonic tissue; thyroid; liver; pancreas; uterus; bone; testis; bladder; salivary gland; prostate; tonsil; blood; spleen; ascites; stomach; ovary; lymph node; mammary gland; thymus; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q24.11
UniSTS entry: Chr 12 STS-R42792
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY210413.1 Homo sapiens cell-line A-431 cell-type epidermoid carcinoma mRNA, partial sequence A
AY007230.1 Homo sapiens mitostatin mRNA, complete cds PA
BX648596.1 Homo sapiens mRNA; cDNA DKFZp686F12209 (from clone DKFZp686F12209) A
BC004285.1 Homo sapiens trichoplein, keratin filament binding, mRNA (cDNA clone MGC:10854 IMAGE:3617849), complete cds PA
NM_032300.4 Homo sapiens trichoplein, keratin filament binding (TCHP), transcript variant 1, mRNA PA
AK301262.1 Homo sapiens cDNA FLJ58860 complete cds, highly similar to Homo sapiens trichoplein, mRNA P
BC022838.1 Homo sapiens trichoplein, keratin filament binding, mRNA (cDNA clone IMAGE:4897871) PA
AK000079.1 Homo sapiens cDNA FLJ20072 fis, clone COL01976 A
NM_001143852.1 Homo sapiens trichoplein, keratin filament binding (TCHP), transcript variant 2, mRNA PA

EST sequences (10 of 114) [Show all sequences]

AA973762.1 Clone IMAGE:1586479 uncharacterized tissue 3' read A
AA975634.1 Clone IMAGE:1591008 kidney 3' read P
R17445.1 Clone IMAGE:32320 brain 5' read
AA923604.1 Clone IMAGE:1534055 kidney 3' read P
AI027430.1 Clone IMAGE:1650177 parathyroid 3' read A
BX097816.1 Clone IMAGp998D243885_;_IMAGE:1534055 kidney PA
CB158699.1 Clone L18POOL1n1-13-D07 liver 5' read
CB116703.1 Clone L6ChoCK0-13-D09 liver 5' read
CB113634.1 Clone B1T694954-2-F03 brain 5' read
AI274069.1 Clone IMAGE:1876921 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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