> Otoancorin (OTOA)
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UGID:221006     UniGene Hs.408336     Homo sapiens (human)   OTOA Order cDNA clone, Links
Otoancorin (OTOA)

Human protein-coding gene OTOA. Represented by 25 ESTs from 9 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 221006 - Hs.408336]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653273.3 OTOA gene product H. sapiens 100.0 1138
XP_001151056.2 PREDICTED: otoancorin isoform 1 P. troglodytes 99.7 1138
NP_647471.1 Otoa gene product M. musculus 80.2 1136
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_002802471.1 PREDICTED: otoancorin-like M. mulatta 96.3 1148
XP_003916712.1 PREDICTED: otoancorin P. anubis 96.0 1138

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; lymph; kidney; connective tissue; mixed; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.2|16p12.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK125840.1 Homo sapiens cDNA FLJ43852 fis, clone TESTI4006802, highly similar to Otoancorin precursor P
BC129993.1 Homo sapiens otoancorin, mRNA (cDNA clone MGC:157747 IMAGE:40128985), complete cds P
BC129992.1 Homo sapiens otoancorin, mRNA (cDNA clone IMAGE:40128977), partial cds P
NM_144672.3 Homo sapiens otoancorin (OTOA), transcript variant 1, mRNA PA
AK093062.1 Homo sapiens cDNA FLJ35743 fis, clone TESTI2004318 P
AK302733.1 Homo sapiens cDNA FLJ56012 complete cds, highly similar to Otoancorin precursor P
NM_001161683.1 Homo sapiens otoancorin (OTOA), transcript variant 3, mRNA PA
BC038458.1 Homo sapiens otoancorin, mRNA (cDNA clone IMAGE:5500439), partial cds PA
NM_170664.2 Homo sapiens otoancorin (OTOA), transcript variant 2, mRNA PA

EST sequences (10 of 25) [Show all sequences]

AI300783.1 Clone IMAGE:1901702 kidney 3' read
AI867309.1 Clone IMAGE:2391368 intestine 3' read
DN831437.1 Clone MGC1.2.1.1.1.C01 mixed P
DN831438.1 Clone MGC1.2.1.1.1.C01 mixed P
DB023169.1 Clone TESTI2004318 testis 5' read P
DB335943.1 Clone TESTI2001991 testis 3' read P
DB336180.1 Clone TESTI2004318 testis 3' read P
DB339674.1 Clone TESTI4006802 testis 3' read P
DB091796.1 Clone TESTI4041253 testis 5' read
DB065672.1 Clone TESTI4006802 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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