Synaptogyrin 4 (SYNGR4)

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UGID:221005 UniGene Hs.408333 Homo sapiens (human) SYNGR4

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Synaptogyrin 4 (SYNGR4)

Human protein-coding gene SYNGR4. Represented by 36 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_012451.3. [UniGene 221005 - Hs.408333]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_036583.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SYNGR4 gene product	H. sapiens	100.0	233
NP_067457.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Syngr4 gene product	M. musculus	75.5	232
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_001154702.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: synaptogyrin-4	P. troglodytes	97.3	218
XP_003915870.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: synaptogyrin-4 isoform 1	P. anubis	94.0	233

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; lung; connective tissue; ascites; mixed; uncharacterized tissue; intestine; stomach

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	19
	Map position:	19q13.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AJ011733.1	Homo sapiens mRNA for synaptogyrin 4 protein	P
NM_012451.3	Homo sapiens synaptogyrin 4 (SYNGR4), mRNA	PA
BC106891.2	Homo sapiens synaptogyrin 4, mRNA (cDNA clone MGC:125805 IMAGE:40030416), complete cds	P

EST sequences (10 of 36) [Show all sequences]

AI081072.1	Clone IMAGE:1638301	testis	3' read	PA
AI214645.1	Clone IMAGE:1883508	lung	3' read	PA
AI214923.1	Clone IMAGE:1883405	lung	3' read	PA
AI222412.1	Clone IMAGE:1843710	mixed	3' read	PA
AA835071.1	Clone IMAGE:1393766	testis	3' read	P
AI582272.1	Clone IMAGE:2213726	lung	3' read	P
AL042440.2	Clone DKFZp434D1821	testis	5' read	A
AW662802.1	Clone IMAGE:2978750	mixed	3' read	P
BF508220.1	Clone IMAGE:3089092	uncharacterized tissue	3' read	PA
BG214564.1		connective tissue

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria