Chromosome 1 open reading frame 110 (C1orf110)

Restricted Expression:

head and neck tumor [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

mouth; trachea; kidney; mixed; brain; placenta

NCBI

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UGID:220752 UniGene Hs.407631 Homo sapiens (human) C1orf110

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Chromosome 1 open reading frame 110 (C1orf110)

Human protein-coding gene C1orf110. Represented by 13 ESTs from 8 cDNA libraries. EST representation biased toward head and neck tumor. Corresponds to reference sequence NM_178550.4. [UniGene 220752 - Hs.407631]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_848645.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C1orf110 gene product	H. sapiens	100.0	301
NP_001028357.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	1700084C01Rik gene product	M. musculus	55.9	286
Other hits (2 of 8) [Show all]		Species	Id(%)	Len(aa)
XP_513956.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: coiled-coil domain-containing protein C1orf110 homolog	P. troglodytes	97.7	301
XP_003893522.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: coiled-coil domain-containing protein C1orf110 homolog	P. anubis	88.0	300

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1q23.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_178550.4	Homo sapiens chromosome 1 open reading frame 110 (C1orf110), mRNA	P
AK123573.1	Homo sapiens cDNA FLJ41579 fis, clone CTONG2019704	P
AK309620.1	Homo sapiens cDNA, FLJ99661
BC040018.1	Homo sapiens chromosome 1 open reading frame 110, mRNA (cDNA clone IMAGE:5753568), containing frame-shift errors	PA

EST sequences (13)

DA657159.1	Clone MESAN2013032	kidney	5' read	P
DA448133.1	Clone CTONG2019704	mouth	5' read	P
DA456107.1	Clone CTONG3001124	mouth	5' read	P
DB302800.1	Clone BRAMY2040863	brain	3' read	A
DB314098.1	Clone CTONG2019704	mouth	3' read
DB238359.1	Clone TRACH3034287	trachea	5' read	P
DB221626.1	Clone TRACH3012349	trachea	5' read
BF987580.1		placenta
EL734355.1		mixed	5' read	P
DC364745.1	Clone MESAN2018977	kidney	5' read
DC346658.1	Clone CTONG2018392	mouth	5' read
BM921939.1	Clone IMAGE:5753545	mixed	5' read	P
BM921956.1	Clone IMAGE:5753568	mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria