> Acyl-CoA synthetase long-chain family member 1 (ACSL1)
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UGID:220210     UniGene Hs.406678     Homo sapiens (human)   ACSL1 Order cDNA clone, Links
Acyl-CoA synthetase long-chain family member 1 (ACSL1)

Human protein-coding gene ACSL1. Represented by 790 ESTs from 230 cDNA libraries. Corresponds to reference sequence NM_001995.2. [UniGene 220210 - Hs.406678]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001986.2 ACSL1 gene product H. sapiens 100.0 697
XP_003950532.1 PREDICTED: long-chain-fatty-acid--CoA ligase 1 P. troglodytes 99.7 697
NP_032007.2 Acsl1 gene product M. musculus 88.8 698
NP_001080443.1 acyl-CoA synthetase long-chain family member 1 protein X. laevis 84.0 697
NP_001027007.1 acsl1 gene product D. rerio 78.6 696
XP_001690836.1 predicted protein C. reinhardtii 61.4 236
NP_490744.1 Protein ACS-13 C. elegans 59.6 671
NP_730369.1 CG3961, isoform A D. melanogaster 57.7 685
NP_566265.1 long-chain acyl-CoA synthetase 6 A. thaliana 56.7 342
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_003899458.1 PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 P. anubis 98.3 697
XP_001083742.2 PREDICTED: long-chain-fatty-acid--CoA ligase 1-like isoform 1 M. mulatta 96.3 697

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; trachea; liver; mixed; mouth; skin; lung; kidney; blood; mammary gland; muscle; embryonic tissue; connective tissue; thymus; larynx; ascites; uterus; uncharacterized tissue; prostate; adrenal gland; bladder; eye; intestine; lymph node; cervix; heart; placenta; adipose tissue; stomach; pancreas; bone marrow; ovary; thyroid; spleen; bone; salivary gland; parathyroid; lymph; nerve; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q35
UniSTS entry: Chr 4 SHGC-50256
UniSTS entry: Chr 4 Bdy94e02 [Map Viewer]
UniSTS entry: Chr 4 D4S3128 [Map Viewer]
UniSTS entry: Chr 4 WI-20005 [Map Viewer]
UniSTS entry: Acsl1
UniSTS entry: Acsl1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC050073.1 Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone MGC:50988 IMAGE:5267238), complete cds PA
NM_001995.2 Homo sapiens acyl-CoA synthetase long-chain family member 1 (ACSL1), mRNA PA
DQ083029.1 Homo sapiens acyl-CoA synthetase long-chain family member 1 isoform a (ACSL1) mRNA, partial cds, alternatively spliced P
DQ083028.1 Homo sapiens acyl-CoA synthetase long-chain family member 1 isoform c (ACSL1) mRNA, partial cds, alternatively spliced P
AK292798.1 Homo sapiens cDNA FLJ76467 complete cds, highly similar to Homo sapiens acyl-CoA synthetase long-chain family member 1 (ACSL1), mRNA P
BC026290.1 Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone IMAGE:4607371), partial cds PA
D10040.1 Homo sapiens mRNA for long-chain acyl-CoA synthetase, complete cds P
AK096117.1 Homo sapiens cDNA FLJ38798 fis, clone LIVER2005028, highly similar to LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) P
AK303486.1 Homo sapiens cDNA FLJ54220 complete cds, highly similar to Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) P
AK296826.1 Homo sapiens cDNA FLJ59311 complete cds, highly similar to Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) P
AK296550.1 Homo sapiens cDNA FLJ53511 complete cds, highly similar to Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) P

EST sequences (10 of 790) [Show all sequences]

AA954731.1 Clone IMAGE:1572896 kidney 3' read A
AA908174.1 Clone IMAGE:1522533 lung 3' read A
AA911778.1 Clone IMAGE:1519656 uncharacterized tissue 3' read A
AI028487.1 Clone IMAGE:1671549 uncharacterized tissue 3' read A
AI027534.1 Clone IMAGE:1650444 parathyroid 3' read A
AI040833.1 Clone IMAGE:1657582 embryonic tissue 3' read A
AI089770.1 Clone IMAGE:1687523 brain 3' read A
AI090741.1 Clone IMAGE:1640180 testis 3' read A
AI094733.1 Clone IMAGE:1686191 brain 3' read A
AI129992.1 Clone IMAGE:1713036 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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