Ribosomal protein S10 (RPS10)

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UGID:220188 UniGene Hs.406620 Homo sapiens (human) RPS10

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Ribosomal protein S10 (RPS10)

Human protein-coding gene RPS10. Represented by 2555 ESTs from 397 cDNA libraries. [UniGene 220188 - Hs.406620]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001244226.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	40S ribosomal protein S10	G. gallus	100.0	164
XP_001116498.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: 40S ribosomal protein S10-like isoform 2	M. mulatta	100.0	164
XP_003904433.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: 40S ribosomal protein S10-like	P. anubis	100.0	164
NP_001190174.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RPS10 gene product	H. sapiens	100.0	164
NP_001238974.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RPS10 gene product	C. lupus familiaris	100.0	164
NP_001231035.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RPS10 gene product	S. scrofa	100.0	164
NP_001029888.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RPS10 gene product	B. taurus	100.0	164
XP_004018811.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: 40S ribosomal protein S10	O. aries	100.0	164
XP_002714657.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: ribosomal protein S10-like	O. cuniculus	100.0	164
NP_080239.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Rps10 gene product	M. musculus	99.4	164
NP_001080728.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ribosomal protein S10	X. laevis	97.6	164
NP_957440.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	rps10 gene product	D. rerio	94.6	165
NP_608324.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ribosomal protein S10b, isoform C	D. melanogaster	73.4	158
XP_001696699.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ribosomal protein S10, component of cytosolic 80S ribosome and 40S small subunit	C. reinhardtii	52.0	172
Other hits (2 of 41) [Show all]		Species	Id(%)	Len(aa)
NP_112371.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Rps10 gene product	R. norvegicus	99.4	164
XP_002199234.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: similar to ribosomal protein S10	T. guttata	99.4	164

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; brain; skin; lung; ovary; mammary gland; uterus; mouth; eye; tonsil; placenta; pancreas; prostate; liver; bone marrow; lymph; intestine; uncharacterized tissue; mixed; muscle; blood; bone; kidney; stomach; testis; ascites; cervix; thyroid; connective tissue; lymph node; larynx; umbilical cord; heart; salivary gland; pharynx; pituitary gland; vascular; ear; bladder; spleen; trachea; adrenal gland; adipose tissue; thymus; parathyroid

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
Map position:	6p21.31
UniSTS entry:	Chr 15	D20S1016
UniSTS entry:	Chr 15	RP_S10
UniSTS entry:	Chr 11	D6S315E
UniSTS entry:		MARC_7223-7224:996687657:1
UniSTS entry:	Chr 1	PMC135632P2

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK025353.1	Homo sapiens cDNA: FLJ21700 fis, clone COL09849, highly similar to HSU14972 Human ribosomal protein S10 mRNA	PA
	Z70761.1	H.sapiens mRNA for ribosomal protein S10

EST sequences (10 of 2555) [Show all sequences]

AA961345.1	Clone IMAGE:1599472	uncharacterized tissue	3' read
AA962563.1	Clone IMAGE:1553620	kidney	3' read	A
AA968844.1	Clone IMAGE:1575037	kidney	3' read
AA903572.1	Clone IMAGE:1518619	uncharacterized tissue	3' read
AI040448.1	Clone IMAGE:1646981	parathyroid	3' read	P
AI053740.1	Clone IMAGE:1861787	ovary	3' read	A
AI053847.1	Clone IMAGE:1862249	ovary	3' read	A
AI053880.1	Clone IMAGE:1862267	ovary	3' read	A
AI053979.1	Clone IMAGE:1861363	ovary	3' read
AI054006.1	Clone IMAGE:1861408	ovary	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria