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UGID:220107     UniGene Hs.406460     Homo sapiens (human)   CCDC117
Coiled-coil domain containing 117 (CCDC117)

Human protein-coding gene CCDC117. Represented by 266 ESTs from 124 cDNA libraries. Corresponds to reference sequence NM_173510.2. [UniGene 220107 - Hs.406460]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_775781.1 CCDC117 gene product H. sapiens 100.0 278
NP_598794.2 Ccdc117 gene product M. musculus 84.1 276
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_001172845.1 PREDICTED: coiled-coil domain-containing protein 117 isoform 1 P. troglodytes 98.6 278
XP_001102936.1 PREDICTED: coiled-coil domain-containing protein 117-like isoform 1 M. mulatta 97.8 278

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; mixed; uncharacterized tissue; placenta; uterus; thyroid; liver; skin; mammary gland; prostate; eye; lymph node; kidney; lung; adipose tissue; embryonic tissue; muscle; thymus; mouth; pancreas; pituitary gland; bone marrow; lymph; stomach; intestine; bladder; cervix; blood; ascites; umbilical cord; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q12.1
UniSTS entry: Chr 22 A002B44 [Map Viewer]
UniSTS entry: Chr 22 WIAF-2134
UniSTS entry: Chr 22 G59579
UniSTS entry: Chr 22 G19906
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_173510.2 Homo sapiens coiled-coil domain containing 117 (CCDC117), mRNA PA
BC053874.1 Homo sapiens coiled-coil domain containing 117, mRNA (cDNA clone MGC:61737 IMAGE:5531689), complete cds PA
AK127794.1 Homo sapiens cDNA FLJ45895 fis, clone OCBBF3023993 P
BC065549.1 Homo sapiens coiled-coil domain containing 117, mRNA (cDNA clone MGC:70940 IMAGE:6045091), complete cds PA
CR456461.1 Homo sapiens dJ366L4.1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.dJ366L4.1.V2) P
AK289516.1 Homo sapiens cDNA FLJ77855 complete cds P
AK092636.1 Homo sapiens cDNA FLJ35317 fis, clone PROST2011038
AK091133.1 Homo sapiens cDNA FLJ33814 fis, clone CTONG2002766 P
AK302925.1 Homo sapiens cDNA FLJ54991 complete cds P
AK302798.1 Homo sapiens cDNA FLJ59662 complete cds PA
AK295140.1 Homo sapiens cDNA FLJ54677 complete cds P
BC040488.1 Homo sapiens coiled-coil domain containing 117, mRNA (cDNA clone MGC:33378 IMAGE:5272169), complete cds PA

EST sequences (10 of 266) [Show all sequences]

AA969156.1 Clone IMAGE:1580284 mixed 3' read A
AA904708.1 Clone IMAGE:1504039 mixed 3' read
AA905158.1 Clone IMAGE:1506992 mixed 3' read A
R21272.1 Clone IMAGE:35555 brain 5' read
AI093952.1 Clone IMAGE:1688538 mixed 3' read A
AI150145.1 Clone IMAGE:1752917 testis 3' read A
BX107697.1 Clone IMAGp998L221889_;_IMAGE:767781 mixed
AI168645.1 Clone IMAGE:1678038 mixed 3' read A
AI263798.1 Clone IMAGE:1855638 mixed 3' read
AI275588.1 Clone IMAGE:1878339 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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