> Ribosomal protein L23 (RPL23)
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UGID:220038     UniGene Hs.406300     Homo sapiens (human)   RPL23 Order cDNA clone, Links
Ribosomal protein L23 (RPL23)

Human protein-coding gene RPL23. Represented by 2018 ESTs from 477 cDNA libraries. Corresponds to reference sequence NM_000978.3. [UniGene 220038 - Hs.406300]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_075029.1 Rpl23 gene product M. musculus 100.0 139
NP_001007600.1 Rpl23 gene product R. norvegicus 100.0 139
XP_001366590.1 PREDICTED: 60S ribosomal protein L23-like M. domestica 100.0 139
XP_003222586.1 PREDICTED: 60S ribosomal protein L23-like A. carolinensis 100.0 139
XP_003964316.1 PREDICTED: 60S ribosomal protein L23-like T. rubripes 100.0 139
NP_957026.1 rpl23 gene product D. rerio 100.0 139
NP_001187049.1 60S ribosomal protein L23 I. punctatus 100.0 139
NP_001154037.1 60S ribosomal protein L23 O. mykiss 100.0 139
XP_004086478.1 PREDICTED: 60S ribosomal protein L23-like O. latipes 100.0 139
XP_003446442.1 PREDICTED: 60S ribosomal protein L23-like O. niloticus 100.0 139
NP_001085921.1 ribosomal protein L23 X. laevis 100.0 139
NP_001011231.1 rpl23 gene product X. tropicalis 100.0 139
XP_418122.3 PREDICTED: 60S ribosomal protein L23 isoform 2 G. gallus 100.0 139
XP_001509789.2 PREDICTED: 60S ribosomal protein L23-like O. anatinus 100.0 139
XP_001084985.1 PREDICTED: 60S ribosomal protein L23 isoform 2 M. mulatta 100.0 139
XP_003892299.1 PREDICTED: 60S ribosomal protein L23-like isoform 1 P. anubis 100.0 139
XP_511444.2 PREDICTED: uncharacterized protein LOC454619 isoform 6 P. troglodytes 100.0 139
NP_000969.1 RPL23 gene product H. sapiens 100.0 139
XP_003362441.1 PREDICTED: 60S ribosomal protein L23-like E. caballus 100.0 139
NP_001123427.1 RPL23 gene product S. scrofa 100.0 139
NP_001030186.1 RPL23 gene product B. taurus 100.0 139
XP_004012877.1 PREDICTED: 60S ribosomal protein L23 O. aries 100.0 139
XP_002719380.1 PREDICTED: ribosomal protein L17 O. cuniculus 100.0 139
XP_003213136.1 PREDICTED: 60S ribosomal protein L23-like, partial M. gallopavo 100.0 134
NP_523813.1 ribosomal protein L23 D. melanogaster 90.7 139
NP_180895.1 60S ribosomal protein L23 A. thaliana 87.9 139
NP_498231.1 Protein RPL-23 C. elegans 87.1 139
XP_965587.1 60S ribosomal protein L23 N. crassa 84.9 138
XP_001698723.1 ribosomal protein L23, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 84.3 139
NP_011042.3 ribosomal 60S subunit protein L23B S. cerevisiae 83.8 136
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
NP_001134137.1 60S ribosomal protein L23 S. salar 99.3 139
NP_001003100.1 RPL23 gene product C. lupus familiaris 99.3 139

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; prostate; lung; liver; brain; eye; skin; intestine; mixed; heart; muscle; uncharacterized tissue; vascular; uterus; placenta; testis; pancreas; ovary; mammary gland; kidney; blood; connective tissue; bone; bone marrow; lymph node; spleen; pharynx; larynx; thymus; stomach; ascites; cervix; lymph; umbilical cord; amniotic fluid; tonsil; salivary gland; adrenal gland; ear; mouth; parathyroid; thyroid; pineal gland; bladder; esophagus; adipose tissue; pituitary gland; epididymis; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q
UniSTS entry: Chr 17 D17S2026 [Map Viewer]
UniSTS entry: Chr 17 RH65811
UniSTS entry: Chr 1 GDB:555019
UniSTS entry: RPL17-L23
UniSTS entry: Chr 17 RH104051
UniSTS entry: Chr 1 D1S3313
UniSTS entry: Chr 11 RH12588
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_000978.3 Homo sapiens ribosomal protein L23 (RPL23), mRNA PA
BC062716.1 Homo sapiens ribosomal protein L23, mRNA (cDNA clone MGC:72008 IMAGE:4094608), complete cds PA
BC104651.1 Homo sapiens ribosomal protein L23, mRNA (cDNA clone MGC:111167 IMAGE:6736195), complete cds PA
BC106061.1 Homo sapiens ribosomal protein L23, mRNA (cDNA clone MGC:117346 IMAGE:4453062), complete cds PA
BC003518.1 Homo sapiens, Similar to ribosomal protein L23, clone IMAGE:3606198, mRNA, partial cds PA
BC010114.2 Homo sapiens ribosomal protein L23, mRNA (cDNA clone MGC:19760 IMAGE:3632936), complete cds PA
AK024749.1 Homo sapiens cDNA: FLJ21096 fis, clone CAS03926 PA
X55954.1 Human mRNA for HL23 ribosomal protein homologue P
X52839.1 Human mRNA for ribosomal protein L17 PA

EST sequences (10 of 2018) [Show all sequences]

AA954117.1 Clone IMAGE:1591235 kidney 3' read P
AA947796.1 Clone IMAGE:1374936 ovary
AA926861.1 Clone IMAGE:1486544 mouth 3' read
AA970801.1 Clone IMAGE:1576500 intestine 3' read
AA988912.1 Clone IMAGE:1602262 lung 3' read P
AA834525.1 Clone IMAGE:1421789 kidney
AA838384.1 Clone IMAGE:1422530 kidney P
AI002266.1 Clone IMAGE:1593202 kidney 3' read P
AI016216.1 Clone IMAGE:1623422 embryonic tissue 3' read P
AI016225.1 Clone IMAGE:1623423 embryonic tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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