> Ribosomal protein L23a pseudogene 82 (RPL23AP82)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:219951     UniGene Hs.406135     Homo sapiens (human)   RPL23AP82 Links
Ribosomal protein L23a pseudogene 82 (RPL23AP82)

Human pseudo gene RPL23AP82. Represented by 123 ESTs from 84 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 219951 - Hs.406135]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003950193.1 PREDICTED: 60S ribosomal protein L23a-like P. troglodytes 86.8 120
NP_997406.1 Rpl23a gene product M. musculus 83.8 142
NP_000975.2 RPL23A gene product H. sapiens 83.8 142
NP_001087299.1 60S ribosomal protein L23a X. laevis 79.5 151
NP_001001593.1 rpl23a gene product D. rerio 78.8 151
NP_001078294.1 60S ribosomal protein L23a-2 A. thaliana 63.2 117
NP_523886.1 ribosomal protein L23A D. melanogaster 61.9 126
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_003584411.1 PREDICTED: 60S ribosomal protein L23a-like B. taurus 85.2 142
XP_004006560.1 PREDICTED: 60S ribosomal protein L23a-like O. aries 85.2 142

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; vascular; uncharacterized tissue; skin; stomach; testis; mixed; muscle; esophagus; prostate; embryonic tissue; pancreas; placenta; eye; thymus; uterus; bone; intestine; mouth; pituitary gland; bladder; kidney; ear; connective tissue; adrenal gland; liver; heart; salivary gland; pineal gland; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.33
UniSTS entry: Chr 5 REN95794
UniSTS entry: Chr 5 D13S676E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC065556.1 Homo sapiens ribosomal protein L23a pseudogene 82, mRNA (cDNA clone IMAGE:6059395) PA
AL365511.1 Novel human gene mapping to chomosome 22
DQ786273.1 Homo sapiens clone HLS_IMAGE_323796 mRNA sequence A
BC010172.2 Homo sapiens similar to RPL23AP7 protein, mRNA (cDNA clone IMAGE:3937944), partial cds A
BC019348.1 Homo sapiens ribosomal protein L23a pseudogene 82, mRNA (cDNA clone IMAGE:3623612) A
AK293095.1 Homo sapiens cDNA FLJ75396 complete cds P
NR_026982.1 Homo sapiens ribosomal protein L23a pseudogene 82 (RPL23AP82), transcript variant 2, non-coding RNA P
NR_026981.1 Homo sapiens ribosomal protein L23a pseudogene 82 (RPL23AP82), transcript variant 1, non-coding RNA P

EST sequences (10 of 123) [Show all sequences]

AI056832.1 Clone IMAGE:1675448 mixed 3' read A
CB045681.1 Clone IMAGE:3218554 intestine 3' read A
CB045682.1 Clone IMAGE:3218554 intestine 5' read
AI148194.1 Clone IMAGE:1680169 skin 3' read PA
BX116417.1 Clone IMAGp998J13273_;_IMAGE:46431 brain A
BX097195.1 Clone IMAGp998I13733_;_IMAGE:323796 skin
CB158872.1 Clone L18POOL1n1-27-F05 liver 5' read P
R33485.1 Clone IMAGE:136334 placenta 3' read
AA824274.1 Clone 1391751 testis 3' read PA
AI525214.1 prostate 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help