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UGID:218286     UniGene Hs.403934     Homo sapiens (human)   LHX8
LIM homeobox 8 (LHX8)

Human protein-coding gene LHX8. Represented by 16 ESTs from 11 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 218286 - Hs.403934]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_524738.2 PREDICTED: LIM/homeobox protein Lhx8 isoform 2 P. troglodytes 100.0 355
NP_001001933.1 LHX8 gene product H. sapiens 100.0 355
XP_001097664.2 PREDICTED: LIM/homeobox protein Lhx8-like M. mulatta 99.7 355
XP_003892128.1 PREDICTED: LIM/homeobox protein Lhx8 isoform 1 P. anubis 99.7 355
XP_002715959.1 PREDICTED: LIM homeobox 8 O. cuniculus 99.7 326
NP_034843.2 Lhx8 gene product M. musculus 97.7 344
NP_001079958.1 LIM homeobox 8 X. laevis 88.6 228
NP_001003980.1 lhx8a gene product D. rerio 80.2 323
NP_523907.2 arrowhead, isoform A D. melanogaster 50.0 200
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_002686347.1 PREDICTED: LIM/homeobox protein Lhx8 B. taurus 99.1 345
XP_547330.3 PREDICTED: LIM/homeobox protein Lhx8 C. lupus familiaris 99.0 299

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; brain; skin; embryonic tissue; pancreas; connective tissue; testis
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p31.1
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_001001933.1 Homo sapiens LIM homeobox 8 (LHX8), transcript variant 1, mRNA PA
BC036423.1 Homo sapiens cDNA clone IMAGE:4797854, containing frame-shift errors PA
NM_001256114.1 Homo sapiens LIM homeobox 8 (LHX8), transcript variant 2, mRNA PA
BC040321.1 Homo sapiens LIM homeobox 8, mRNA (cDNA clone MGC:43046 IMAGE:4839343), complete cds PA

EST sequences (10 of 16) [Show all sequences]

CR735202.1 Clone IMAGp958B211179_;_IMAGE:4308020 skin 5' read P
CR735617.1 Clone IMAGp958N111159_;_IMAGE:4300618 pancreas 5' read P
DN831209.1 Clone MGC1. mixed
DN831210.1 Clone MGC1. mixed P
DR002427.1 Clone TC103728 brain 5' read P
DR007906.1 Clone MGC5. mixed P
BF572867.1 Clone IMAGE:4254128 skin 5' read P
DB358728.1 Clone HEMBA1007349 embryonic tissue 3' read
DB319894.1 Clone HSYRA2001255 connective tissue 3' read
BF978460.1 Clone IMAGE:4307609 skin 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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