Striatin, calmodulin binding protein 3 (STRN3)

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UGID:216829 UniGene Hs.401843 Homo sapiens (human) STRN3

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Striatin, calmodulin binding protein 3 (STRN3)

Human protein-coding gene STRN3. Represented by 130 ESTs from 90 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 216829 - Hs.401843]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001077362.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	STRN3 gene product	H. sapiens	100.0	796
XP_509887.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: striatin-3	P. troglodytes	99.7	703
NP_443205.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Strn3 gene product	M. musculus	97.2	795
NP_001013284.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	strn3 gene product	D. rerio	87.5	698
NP_001086983.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	striatin, calmodulin binding protein 3	X. laevis	85.7	740
NP_001245936.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	connector of kinase to AP-1, isoform E	D. melanogaster	62.4	747
NP_505664.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein CASH-1	C. elegans	51.8	363
Other hits (2 of 36) [Show all]		Species	Id(%)	Len(aa)
XP_003901732.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: striatin-3	P. anubis	99.5	781
XP_002805063.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: striatin-3-like	M. mulatta	99.1	792

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; mouth; thyroid; prostate; kidney; mixed; uncharacterized tissue; liver; lymph node; brain; placenta; uterus; lung; intestine; pancreas; mammary gland; pituitary gland; bone marrow; muscle; vascular; trachea; larynx; ear; eye; blood; skin; adrenal gland; ovary; bone; testis; stomach

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	14
Map position:	14q13-q21
UniSTS entry:	Chr 14	SGC31556	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AF243424.1	Homo sapiens SG2NA beta isoform mRNA, partial cds	P
NM_014574.3	Homo sapiens striatin, calmodulin binding protein 3 (STRN3), transcript variant 2, mRNA	PA
BC126221.1	Homo sapiens striatin, calmodulin binding protein 3, mRNA (cDNA clone MGC:161499 IMAGE:8991937), complete cds	P
BC132673.1	Homo sapiens striatin, calmodulin binding protein 3, mRNA (cDNA clone MGC:164304 IMAGE:40146695), complete cds	P
NM_001083893.1	Homo sapiens striatin, calmodulin binding protein 3 (STRN3), transcript variant 1, mRNA	PA
AK290229.1	Homo sapiens cDNA FLJ77970 complete cds, highly similar to Homo sapiens nuclear autoantigen GS2NA mRNA	P
U17989.1	Homo sapiens nuclear autoantigen GS2NA mRNA, complete cds	P
AK314041.1	Homo sapiens cDNA, FLJ94701, highly similar to Homo sapiens striatin, calmodulin binding protein 3 (STRN3), mRNA	P
BC143933.1	Homo sapiens cDNA clone IMAGE:9052451	P

EST sequences (10 of 130) [Show all sequences]

R15125.1	Clone IMAGE:29629	brain	5' read
AI081274.1	Clone IMAGE:1637516	uncharacterized tissue	3' read	A
CB068429.1	Clone IMAGE:6365282	pancreas	3' read	A
CB142595.1	Clone L16HLK3-25-E09	liver	5' read
CB159719.1	Clone L18POOL1n1-26-B05	liver	5' read
CB113023.1	Clone L6ChoCK0-8-D03	liver	5' read	A
CB147688.1	Clone L14ChoiCK0-17-H11	liver	5' read	P
CB177336.1	Clone IMAGE:6365282	pancreas	5' read
CB215669.1	Clone IMAGE:5937181	uterus	5' read	P
AI470372.1	Clone IMAGE:2144234	mixed	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria