Chromosome 16 open reading frame 45 (C16orf45)

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UGID:216795 UniGene Hs.401798 Homo sapiens (human) C16orf45

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Chromosome 16 open reading frame 45 (C16orf45)

Human protein-coding gene C16orf45. Represented by 549 ESTs from 200 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 216795 - Hs.401798]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001108606.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C16orf45 homolog isoform 2	M. mulatta	100.0	203
NP_001233353.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C16H16orf45 gene product	P. troglodytes	100.0	203
NP_149978.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C16orf45 gene product	H. sapiens	100.0	203
XP_003916645.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C16orf45 homolog, partial	P. anubis	100.0	126
NP_653101.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein C16orf45 homolog	M. musculus	97.0	202
NP_001028910.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	zgc:114175 gene product	D. rerio	70.1	183
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_851805.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C16orf45 homolog	C. lupus familiaris	99.0	203
NP_001071545.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C25H16orf45 gene product	B. taurus	98.2	169

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; testis; mixed; lung; uterus; muscle; eye; uncharacterized tissue; liver; thyroid; pancreas; mammary gland; embryonic tissue; kidney; skin; connective tissue; cervix; intestine; spleen; thymus; adrenal gland; blood; salivary gland; ovary; heart; prostate; stomach; vascular; umbilical cord; bone marrow; placenta; pituitary gland; bone; mouth; lymph; ganglia

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
Map position:	16p13.11
UniSTS entry:	Chr 16	RH65283
UniSTS entry:	Chr 16	RH41898	[Map Viewer]
UniSTS entry:	Chr 16	STS-AA027340
UniSTS entry:	Chr 16	SHGC-56757
UniSTS entry:	Chr 1	D10S16
UniSTS entry:	Chr 1	G35510
UniSTS entry:	Chr 1	D1S1425
UniSTS entry:	Chr 1	D8S2278

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK130610.1	Homo sapiens cDNA FLJ27100 fis, clone SPL04666
BC008967.2	Homo sapiens chromosome 16 open reading frame 45, mRNA (cDNA clone MGC:4532 IMAGE:3010666), complete cds	PA
AK057180.1	Homo sapiens cDNA FLJ32618 fis, clone STOMA2000289	P
AK092923.1	Homo sapiens cDNA FLJ35604 fis, clone SPLEN2009315
AK293431.1	Homo sapiens cDNA FLJ55322 complete cds	P
NM_001142469.1	Homo sapiens chromosome 16 open reading frame 45 (C16orf45), transcript variant 2, mRNA	P
BC023603.2	Homo sapiens chromosome 16 open reading frame 45, mRNA (cDNA clone MGC:23263 IMAGE:4330351), complete cds	PA
NM_033201.2	Homo sapiens chromosome 16 open reading frame 45 (C16orf45), transcript variant 1, mRNA	P

EST sequences (10 of 549) [Show all sequences]

AA954386.1	Clone IMAGE:1564885	mixed	3' read	A
AA970855.1	Clone IMAGE:1572640	kidney	3' read	A
AA978205.1	Clone IMAGE:1578670	mixed	3' read
R17583.1	Clone IMAGE:32328	brain	5' read	P
AI005469.1	Clone IMAGE:1626244	mixed	3' read	A
R18204.1	Clone IMAGE:30456	brain	5' read
R18510.1	Clone IMAGE:30484	brain	5' read
AI028740.1	Clone IMAGE:1644837	testis	3' read	A
R20088.1	Clone IMAGE:34820	brain	5' read
AI141657.1	Clone IMAGE:1614226	uncharacterized tissue	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria