> Interferon regulatory factor 4 (IRF4)
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UGID:216174     UniGene Hs.401013     Homo sapiens (human)   IRF4 Order cDNA clone, Links
Interferon regulatory factor 4 (IRF4)

Human protein-coding gene IRF4. Represented by 241 ESTs from 66 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 216174 - Hs.401013]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002451.2 IRF4 gene product H. sapiens 100.0 450
XP_518201.2 PREDICTED: interferon regulatory factor 4 P. troglodytes 99.8 450
NP_038702.1 Irf4 gene product M. musculus 93.8 449
NP_001116182.1 interferon regulatory factor 4 D. rerio 71.1 457
NP_001087097.1 interferon regulatory factor 8 X. laevis 56.0 336
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_001118967.2 PREDICTED: interferon regulatory factor 4 M. mulatta 98.7 450
XP_001487915.1 PREDICTED: interferon regulatory factor 4 E. caballus 96.2 451

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; skin; mixed; blood; lymph node; stomach; mouth; lung; lymph; uterus; placenta; tonsil; spleen; pharynx; brain; intestine; connective tissue; kidney; eye; prostate; thymus; nerve; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p25-p23
UniSTS entry: Chr 6 STS-N33454
UniSTS entry: Chr 6 SHGC-106840
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_002460.3 Homo sapiens interferon regulatory factor 4 (IRF4), transcript variant 1, mRNA PA
BC015752.1 Homo sapiens interferon regulatory factor 4, mRNA (cDNA clone MGC:23069 IMAGE:4861223), complete cds PA
U52682.1 Human lymphocyte specific interferon regulatory factor/interferon regulatory factor 4 (LSIRF/IRF4) mRNA, complete cds P
AK310149.1 Homo sapiens cDNA, FLJ17191 P
U63738.1 Human multiple myeloma oncogene 1 (MUM1) mRNA, partial cds P
NM_001195286.1 Homo sapiens interferon regulatory factor 4 (IRF4), transcript variant 2, mRNA P
NR_046000.1 Homo sapiens interferon regulatory factor 4 (IRF4), transcript variant 4, non-coding RNA PA

EST sequences (10 of 241) [Show all sequences]

R17056.1 Clone IMAGE:129784 mixed 5' read
R17057.1 Clone IMAGE:129784 mixed 3' read
AI041586.1 Clone IMAGE:1660374 mixed 3' read A
AI074662.1 Clone IMAGE:1662886 mixed 3' read A
AI125911.1 Clone IMAGE:1712190 uterus 3' read
AI087048.1 Clone IMAGE:1671163 uncharacterized tissue 3' read A
BX107299.1 Clone IMAGp998A17650_;_IMAGE:291736 skin
AI276258.1 Clone IMAGE:1877211 mixed 3' read A
AI224145.1 Clone IMAGE:1858510 mixed 3' read A
AI224170.1 Clone IMAGE:1858523 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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