> Ribosomal protein S16 (RPS16)
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UGID:213926     UniGene Hs.397609     Homo sapiens (human)   RPS16 Order cDNA clone, Links
Ribosomal protein S16 (RPS16)

Human protein-coding gene RPS16. Represented by 2864 ESTs from 513 cDNA libraries. Corresponds to reference sequence NM_001020.4. [UniGene 213926 - Hs.397609]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003915560.1 PREDICTED: 40S ribosomal protein S16 P. anubis 100.0 149
XP_001363137.1 PREDICTED: 40S ribosomal protein S16-like M. domestica 100.0 145
XP_003221173.1 PREDICTED: 40S ribosomal protein S16-like A. carolinensis 100.0 145
XP_002801287.1 PREDICTED: 40S ribosomal protein S16-like M. mulatta 100.0 145
XP_512651.1 PREDICTED: uncharacterized protein LOC456023 isoform 8 P. troglodytes 100.0 145
NP_001011.1 RPS16 gene product H. sapiens 100.0 145
XP_001498092.1 PREDICTED: 40S ribosomal protein S16-like E. caballus 100.0 145
NP_001131092.1 RPS16 gene product S. scrofa 100.0 145
NP_001028796.1 RPS16 gene product B. taurus 100.0 145
XP_002711497.1 PREDICTED: ribosomal protein S16-like O. cuniculus 100.0 145
XP_003085801.1 PREDICTED: 40S ribosomal protein S16-like M. musculus 99.4 164
NP_001070200.1 rps16 gene product D. rerio 97.3 145
NP_001085213.1 ribosomal protein S16 X. laevis 97.2 105
NP_611685.1 ribosomal protein S16 D. melanogaster 91.8 146
NP_197339.1 40S ribosomal protein S16-3 A. thaliana 82.2 145
NP_506690.1 Protein RPS-16 C. elegans 78.2 141
XP_001693495.1 ribosomal protein S16, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 71.6 140
XP_964828.1 40S ribosomal protein S16 N. crassa 71.6 140
NP_010200.1 ribosomal 40S subunit protein S16B S. cerevisiae 66.9 141
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_533674.3 PREDICTED: 40S ribosomal protein S16 C. lupus familiaris 99.4 173
XP_341816.4 PREDICTED: 40S ribosomal protein S16 R. norvegicus 99.4 169

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; embryonic tissue; brain; uterus; ovary; lung; skin; muscle; prostate; mixed; intestine; liver; eye; placenta; heart; uncharacterized tissue; mammary gland; kidney; stomach; spleen; lymph; blood; bone marrow; bone; cervix; adrenal gland; testis; tonsil; thymus; umbilical cord; vascular; amniotic fluid; mouth; connective tissue; lymph node; ascites; parathyroid; pituitary gland; thyroid; salivary gland; trachea; ear; larynx; bladder; esophagus; epididymis; adipose tissue; pharynx; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.1
UniSTS entry: Chr 19 G31561
UniSTS entry: Chr 19 HUM0S11D12
UniSTS entry: Chr 19 RP_S16_1 [Map Viewer]
UniSTS entry: Chr 14 PMC97568P1
UniSTS entry: Chr 15 Rnu2
UniSTS entry: Chr 1 PMC156606P3
UniSTS entry: Chr 1 RH93751
UniSTS entry: Chr 2 RH66468
UniSTS entry: Chr 12 PMC17321P1
UniSTS entry: PMC92356P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_001020.4 Homo sapiens ribosomal protein S16 (RPS16), mRNA PA
BC071674.1 Homo sapiens ribosomal protein S16, mRNA (cDNA clone MGC:87876 IMAGE:5394209), complete cds PA
BC095429.1 Homo sapiens ribosomal protein S16, mRNA (cDNA clone IMAGE:30710507) PA
M60854.1 Human ribosomal protein S16 mRNA, complete cds P
BC004324.2 Homo sapiens ribosomal protein S16, mRNA (cDNA clone MGC:10931 IMAGE:3628799), complete cds PA
BC007977.2 Homo sapiens ribosomal protein S16, mRNA (cDNA clone MGC:15283 IMAGE:4310307), complete cds PA
AK055869.1 Homo sapiens cDNA FLJ31307 fis, clone LIVER1000132, weakly similar to 40S RIBOSOMAL PROTEIN S16 P
AK315498.1 Homo sapiens cDNA, FLJ96562, Homo sapiens ribosomal protein S16 (RPS16), mRNA P
BC024970.1 Homo sapiens ribosomal protein S16, mRNA (cDNA clone IMAGE:3857175) PA

EST sequences (10 of 2864) [Show all sequences]

AA961846.1 Clone IMAGE:1600321 uncharacterized tissue 3' read P
AA970976.1 Clone IMAGE:1575270 kidney 3' read P
AA984880.1 Clone IMAGE:1576611 spleen 3' read PA
AA985257.1 Clone IMAGE:1577232 spleen 3' read PA
AA988782.1 Clone IMAGE:1602600 lung 3' read P
AA995294.1 Clone IMAGE:1606581 kidney 3' read A
AA995746.1 Clone IMAGE:1605203 lung 3' read P
AI000225.1 Clone IMAGE:1613852 uncharacterized tissue 3' read PA
AI015503.1 Clone IMAGE:1618677 testis 3' read PA
AI082281.1 Clone IMAGE:1637473 uncharacterized tissue 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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