Coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2)

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UGID:208125 UniGene Hs.389996 Homo sapiens (human) CHCHD2

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Coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2)

Human protein-coding gene CHCHD2. Represented by 1093 ESTs from 335 cDNA libraries. Corresponds to reference sequence NM_016139.2. [UniGene 208125 - Hs.389996]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001161277.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial isoform 3	P. troglodytes	100.0	150
NP_057223.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CHCHD2 gene product	H. sapiens	100.0	150
NP_077128.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Chchd2 gene product	M. musculus	90.8	152
NP_001091277.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC100037085	X. laevis	90.8	152
NP_957061.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	chchd2 gene product	D. rerio	67.9	167
Other hits (2 of 19) [Show all]		Species	Id(%)	Len(aa)
XP_001089512.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like isoform 2	M. mulatta	99.3	150
XP_003909277.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like	P. anubis	98.7	150

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; skin; uterus; pancreas; intestine; prostate; lung; testis; mixed; eye; uncharacterized tissue; placenta; stomach; mammary gland; heart; kidney; muscle; parathyroid; pituitary gland; liver; embryonic tissue; adrenal gland; mouth; salivary gland; thyroid; pineal gland; ascites; ovary; cervix; lymph; tonsil; bone marrow; blood; adipose tissue; connective tissue; bone; vascular; ear; nerve; umbilical cord; pharynx; thymus; lymph node; spleen; bladder; larynx

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	7
Map position:	7p11.2
UniSTS entry:	Chr 7	RH103090
UniSTS entry:	Chr 7	G62103
UniSTS entry:	Chr 7	RH79870

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC066331.1	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2, mRNA (cDNA clone MGC:87328 IMAGE:4792941), complete cds	PA
BC071985.1	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2, mRNA (cDNA clone MGC:88682 IMAGE:6426679), complete cds	PA
NM_016139.2	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2), nuclear gene encoding mitochondrial protein, mRNA	PA
BC100275.1	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2, mRNA (cDNA clone MGC:117146 IMAGE:6192342), complete cds	PA
BC003079.2	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2, mRNA (cDNA clone MGC:699 IMAGE:2988156), complete cds	PA
BC015639.2	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2, mRNA (cDNA clone MGC:23279 IMAGE:4637353), complete cds	PA
AF078845.1	Homo sapiens 16.7Kd protein mRNA, complete cds	PA
Z36851.1	H.sapiens (xs99) mRNA, 344bp

EST sequences (10 of 1093) [Show all sequences]

AA953636.1	Clone IMAGE:1591206	kidney	3' read	A
AA864693.1	Clone IMAGE:1456622	kidney	3' read	A
AA968711.1	Clone IMAGE:1601125	uncharacterized tissue	3' read	A
AA988211.1	Clone IMAGE:1603935	lung	3' read	A
AA989395.1	Clone IMAGE:1606159	kidney	3' read	A
AA994618.1	Clone IMAGE:1619642	testis	3' read	A
AI028436.1	Clone IMAGE:1646196	parathyroid	3' read	A
AI028468.1	Clone IMAGE:1646221	parathyroid	3' read	A
AI028470.1	Clone IMAGE:1646225	parathyroid	3' read	A
AI038240.1	Clone IMAGE:1663929	skin	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria