> Tetraspanin 1 (TSPAN1)
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UGID:136663     UniGene Hs.38972     Homo sapiens (human)   TSPAN1 Order cDNA clone, Links
Tetraspanin 1 (TSPAN1)

Human protein-coding gene TSPAN1. Represented by 492 ESTs from 162 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_005727.3. [UniGene 136663 - Hs.38972]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_524576.1 PREDICTED: tetraspanin-1 P. troglodytes 100.0 240
NP_005718.2 TSPAN1 gene product H. sapiens 100.0 240
NP_598442.1 Tspan1 gene product M. musculus 80.0 239
NP_001088942.1 tetraspanin 1 X. laevis 66.5 239
NP_001038906.1 zgc:153650 gene product D. rerio 49.6 232
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
XP_001107435.1 PREDICTED: tetraspanin-1 isoform 2 M. mulatta 95.8 239
XP_003891854.1 PREDICTED: tetraspanin-1 P. anubis 95.8 239

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; prostate; pharynx; mixed; kidney; lung; pancreas; stomach; uterus; testis; brain; uncharacterized tissue; thyroid; mammary gland; liver; ovary; bladder; parathyroid; embryonic tissue; bone marrow; muscle; placenta; blood; cervix; eye; ascites; skin; esophagus; heart; pituitary gland; nerve; bone; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p34.1
UniSTS entry: Chr 1 SHGC-74773 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AF065388.1 Homo sapiens tetraspan NET-1 mRNA, complete cds P
NM_005727.3 Homo sapiens tetraspanin 1 (TSPAN1), mRNA PA
AF133425.1 Homo sapiens tetraspanin TM4-C mRNA, complete cds P
BC007290.1 Homo sapiens tetraspanin 1, mRNA (cDNA clone MGC:15665 IMAGE:3349295), complete cds PA
BC013404.2 Homo sapiens tetraspanin 1, mRNA (cDNA clone MGC:4439 IMAGE:2959379), complete cds PA
AK313774.1 Homo sapiens cDNA, FLJ94379, Homo sapiens tetraspan 1 (TSPAN-1), mRNA P
BC000695.2 Homo sapiens cDNA clone IMAGE:3349380, containing frame-shift errors PA
AF054838.1 Homo sapiens tetraspan TM4SF (TSPAN-1) mRNA, complete cds P

EST sequences (10 of 492) [Show all sequences]

AA923530.1 Clone IMAGE:1536179 kidney 3' read P
AI004857.1 Clone IMAGE:1621036 testis 3' read
AI041400.1 Clone IMAGE:1648806 parathyroid 3' read
AI075023.1 Clone IMAGE:1594333 intestine 3' read
AI090945.1 Clone IMAGE:1690390 mixed 3' read
AI091832.1 Clone IMAGE:1690947 mixed 3' read
CB049091.1 Clone IMAGE:3271065 prostate 3' read A
CB049092.1 Clone IMAGE:3271065 prostate 5' read A
AI223258.1 Clone IMAGE:1838422 testis 3' read A
AI199399.1 Clone IMAGE:1943935 prostate 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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