> Tetratricopeptide repeat domain 28 (TTC28)
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UGID:206921     UniGene Hs.387856     Homo sapiens (human)   TTC28 Order cDNA clone, Links
Tetratricopeptide repeat domain 28 (TTC28)

Human protein-coding gene TTC28. Represented by 215 ESTs from 115 cDNA libraries. Corresponds to reference sequence NM_001145418.1. [UniGene 206921 - Hs.387856]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001138890.1 TTC28 gene product H. sapiens 100.0 2480
XP_001172489.1 PREDICTED: tetratricopeptide repeat protein 28 P. troglodytes 99.8 2480
NP_001254551.1 Ttc28 gene product M. musculus 93.1 2449
XP_002667710.2 PREDICTED: tetratricopeptide repeat protein 28-like D. rerio 82.2 2167
NP_001246673.1 CG43163, isoform D D. melanogaster 53.0 1965
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_001108189.1 PREDICTED: tetratricopeptide repeat protein 28-like, partial M. mulatta 99.4 2353
XP_003905415.1 PREDICTED: tetratricopeptide repeat protein 28-like, partial P. anubis 99.3 2169

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; uterus; testis; uncharacterized tissue; connective tissue; mixed; lung; pancreas; muscle; lymph node; eye; liver; ovary; prostate; spleen; placenta; mammary gland; thyroid; intestine; bone; cervix; skin; heart; kidney; pharynx; ear; larynx; bladder; blood; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q12.1
UniSTS entry: Chr 22 D22S986E
UniSTS entry: Chr 22 D22S1262
UniSTS entry: Chr 22 RH69365
UniSTS entry: Chr 1 D18S21
UniSTS entry: Chr 22 G65733
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AB028966.3 Homo sapiens mRNA for KIAA1043 protein, partial cds P
AL080174.1 Homo sapiens mRNA; cDNA DKFZp434I091 (from clone DKFZp434I091) PA
AL137328.1 Homo sapiens mRNA; cDNA DKFZp434A2372 (from clone DKFZp434A2372) PA
BC016465.1 Homo sapiens tetratricopeptide repeat domain 28, mRNA (cDNA clone MGC:18145 IMAGE:4154050), complete cds PA
AK055553.1 Homo sapiens cDNA FLJ30991 fis, clone HLUNG1000041
AK092338.1 Homo sapiens cDNA FLJ35019 fis, clone OCBBF2014541
NM_001145418.1 Homo sapiens tetratricopeptide repeat domain 28 (TTC28), mRNA P
AB665284.1 Homo sapiens TPRBK mRNA for TPR-containing big gene cloned at Keio, complete cds

EST sequences (10 of 215) [Show all sequences]

AA992043.1 Clone IMAGE:1618880 testis 3' read
AI005637.1 Clone IMAGE:1641595 testis 3' read A
AI089133.1 Clone IMAGE:1634496 mixed 3' read A
BX110718.1 Clone IMAGp998N15173_;_IMAGE:41340 brain A
AI271769.1 Clone IMAGE:1865495 kidney 3' read
AI306147.1 Clone IMAGE:1855552 mixed 3' read
R37806.1 Clone IMAGE:27299 brain 3' read A
AI337460.1 Clone IMAGE:2062529 intestine 3' read A
AI568917.1 Clone IMAGE:2179937 uterus 3' read A
AI633156.1 Clone IMAGE:2289075 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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