> Breast carcinoma amplified sequence 4 (BCAS4)
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UGID:204180     UniGene Hs.381178     Homo sapiens (human)   BCAS4 Order cDNA clone, Links
Breast carcinoma amplified sequence 4 (BCAS4)

Human protein-coding gene BCAS4. Represented by 82 ESTs from 51 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 204180 - Hs.381178]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060313.3 BCAS4 gene product H. sapiens 100.0 210
XP_001168054.1 PREDICTED: breast carcinoma-amplified sequence 4 isoform 2 P. troglodytes 99.5 210
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_001095529.1 PREDICTED: breast carcinoma-amplified sequence 4 isoform 2 M. mulatta 98.0 202
XP_003904663.1 PREDICTED: breast carcinoma-amplified sequence 4 P. anubis 98.0 202

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; uncharacterized tissue; pancreas; lymph node; bladder; brain; embryonic tissue; kidney; prostate; heart; mixed; lymph; skin; thymus; liver; tonsil; connective tissue; ascites; blood; intestine; ovary; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.13
UniSTS entry: Chr 20 RH65330 [Map Viewer]
UniSTS entry: Chr 20 SHGC-64933
UniSTS entry: Chr 20 Tmsb4x
UniSTS entry: Chr 2 D9S1007E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC047337.1 Homo sapiens breast carcinoma amplified sequence 4, mRNA (cDNA clone IMAGE:5500336), partial cds PA
BC056883.1 Homo sapiens breast carcinoma amplified sequence 4, mRNA (cDNA clone IMAGE:5764497), partial cds PA
NM_198799.2 Homo sapiens breast carcinoma amplified sequence 4 (BCAS4), transcript variant 2, mRNA PA
AK000502.1 Homo sapiens cDNA FLJ20495 fis, clone KAT08572 PA
NM_017843.3 Homo sapiens breast carcinoma amplified sequence 4 (BCAS4), transcript variant 1, mRNA PA
NM_001010974.1 Homo sapiens breast carcinoma amplified sequence 4 (BCAS4), transcript variant 3, mRNA PA
BC112282.1 Homo sapiens thymosin-like 6 (pseudogene), mRNA (cDNA clone IMAGE:8327750)
AF361220.1 Homo sapiens breast carcinoma amplified sequence 4 (BCAS4) mRNA, complete cds PA
BC038381.1 Homo sapiens breast carcinoma amplified sequence 4, mRNA (cDNA clone MGC:21149 IMAGE:4472674), complete cds PA
AJ511266.1 Homo sapiens partial mRNA for breast carcinoma amplified sequence 4 protein (BCAS4 gene), isoform 1 P

EST sequences (10 of 82) [Show all sequences]

AA977251.1 Clone IMAGE:1558820 lung 3' read
CB048529.1 Clone IMAGE:3270944 prostate 3' read
CB048530.1 Clone IMAGE:3270944 prostate 5' read
CB051214.1 Clone IMAGE:3289270 prostate 3' read
AI167339.1 Clone IMAGE:1682379 skin 3' read A
AI168061.1 Clone IMAGE:1682494 skin 3' read A
BX101721.1 Clone IMAGp998I044271_;_IMAGE:1682379 skin
AI185223.1 Clone IMAGE:1742112 lung 3' read A
AI223962.1 Clone IMAGE:2000672 lymph node 3' read A
AI278904.1 Clone IMAGE:1912040 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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