> Ribosomal protein L21 (RPL21)
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UGID:204148     UniGene Hs.381123     Homo sapiens (human)   RPL21 Order cDNA clone, Links
Ribosomal protein L21 (RPL21)

Human protein-coding gene RPL21. Represented by 2423 ESTs from 434 cDNA libraries. Corresponds to reference sequence NM_000982.3. [UniGene 204148 - Hs.381123]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_062621.2 Rpl21 gene product M. musculus 100.0 159
XP_002728035.1 PREDICTED: 60S ribosomal protein L21-like R. norvegicus 100.0 159
XP_001367005.1 PREDICTED: 60S ribosomal protein L21-like M. domestica 100.0 159
XP_001110998.1 PREDICTED: 60S ribosomal protein L21-like isoform 1 M. mulatta 100.0 159
XP_003897822.1 PREDICTED: 60S ribosomal protein L21-like P. anubis 100.0 159
XP_001159207.2 PREDICTED: 60S ribosomal protein L21-like isoform 2 P. troglodytes 100.0 159
NP_000973.2 RPL21 gene product H. sapiens 100.0 159
NP_001238973.1 60S ribosomal protein L21 C. lupus familiaris 100.0 159
XP_001495212.1 PREDICTED: 60S ribosomal protein L21-like E. caballus 100.0 159
XP_003482912.1 PREDICTED: 60S ribosomal protein L21-like isoform 1 S. scrofa 100.0 159
NP_001178341.1 RPL21 gene product B. taurus 100.0 159
XP_004012204.1 PREDICTED: 60S ribosomal protein L21 O. aries 100.0 159
XP_002710693.1 PREDICTED: ribosomal protein L21-like O. cuniculus 100.0 159
NP_001002155.1 rpl21 gene product D. rerio 92.5 159
NP_001079727.1 ribosomal protein L21 X. laevis 91.9 159
NP_610144.1 ribosomal protein L21, isoform A D. melanogaster 78.0 158
NP_498774.1 Protein RPL-21 C. elegans 68.3 160
NP_009750.1 ribosomal 60S subunit protein L21A S. cerevisiae 63.1 159
XP_964232.1 60S ribosomal protein L21 N. crassa 62.9 159
NP_563847.1 60S ribosomal protein L21-1 A. thaliana 51.2 163
Other hits (2 of 47) [Show all]SpeciesId(%)Len(aa)
NP_001232566.1 LOC100190647 gene product T. guttata 98.8 159
XP_003203454.1 PREDICTED: 60S ribosomal protein L21-like isoform 1 M. gallopavo 98.1 159

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mixed; pancreas; brain; liver; prostate; eye; lung; testis; muscle; intestine; skin; tonsil; placenta; blood; uncharacterized tissue; bone marrow; ovary; bone; mammary gland; uterus; vascular; heart; kidney; lymph; adrenal gland; pharynx; ascites; umbilical cord; ear; pituitary gland; thymus; stomach; bladder; salivary gland; connective tissue; spleen; mouth; thyroid; cervix; adipose tissue; lymph node; nerve; pineal gland; parathyroid; larynx; esophagus; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q12.2
UniSTS entry: Chr 15 G35757
UniSTS entry: Chr 17 SHGC-12628 [Map Viewer]
UniSTS entry: Chr 13 WI-22777 [Map Viewer]
UniSTS entry: Chr 4 D13S1456
UniSTS entry: Chr 13 RP_L21_1 [Map Viewer]
UniSTS entry: Chr 4 D9S1310
UniSTS entry: Chr 17 RH10564
UniSTS entry: Chr 17 SHGC-31911 [Map Viewer]
UniSTS entry: Chr 17 G19761
UniSTS entry: Chr 2 A004C36
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AY320407.1 Homo sapiens nasopharyngeal carcinoma-associated antigen mRNA sequence P
BX647669.1 Homo sapiens mRNA; cDNA DKFZp686C06101 (from clone DKFZp686C06101) PA
AK130968.1 Homo sapiens cDNA FLJ27458 fis, clone DMC06607, highly similar to 60S ribosomal protein L21 P
NM_000982.3 Homo sapiens ribosomal protein L21 (RPL21), mRNA PA
BC062981.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:71252 IMAGE:6084268), complete cds PA
BC070330.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:88334 IMAGE:3931616), complete cds PA
BC070184.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:88165 IMAGE:4281405), complete cds PA
BC070323.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:88326 IMAGE:4248655), complete cds PA
BC070185.1 Homo sapiens similar to 60S ribosomal protein L21, mRNA (cDNA clone IMAGE:6653881) PA
CR457032.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0315D for gene RPL21, ribosomal protein L21; complete cds, incl. stopcodon P
BC071902.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:88581 IMAGE:4901492), complete cds PA
X89401.1 H.sapiens mRNA for large subunit of ribosomal protein L21 P
BC104667.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:104275 IMAGE:6724053), complete cds PA
BC001603.1 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:2150 IMAGE:3543702), complete cds PA
BC007505.2 Homo sapiens ribosomal protein L21, mRNA (cDNA clone MGC:4136 IMAGE:2964441), complete cds PA
AK311795.1 Homo sapiens cDNA, FLJ92056, Homo sapiens ribosomal protein L21 (RPL21), mRNA P
BC019002.2 Homo sapiens ribosomal protein L21, mRNA (cDNA clone IMAGE:4543963) PA
AF086172.1 Homo sapiens full length insert cDNA clone ZB89E10 PA
U14967.1 Human ribosomal protein L21 mRNA, complete cds P

EST sequences (10 of 2423) [Show all sequences]

AA961379.1 Clone IMAGE:1597801 uncharacterized tissue 3' read P
AA969685.1 Clone IMAGE:1574716 kidney 3' read
AA977301.1 Clone IMAGE:1589982 kidney 3' read PA
AA984895.1 Clone IMAGE:1576643 spleen 3' read PA
AA985443.1 Clone IMAGE:1592877 kidney 3' read A
AA996051.1 Clone IMAGE:1607121 mammary gland 3' read A
AI000767.1 Clone IMAGE:1613719 uncharacterized tissue 3' read P
AA923539.1 Clone IMAGE:1536206 kidney 3' read A
AI025106.1 Clone IMAGE:1639791 testis 3' read PA
AI056217.1 Clone IMAGE:1673539 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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