> Neural precursor cell expressed, developmentally down-regulated 9 (NEDD9)
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UGID:136582     UniGene Hs.37982     Homo sapiens (human)   NEDD9 Order cDNA clone, Links
Neural precursor cell expressed, developmentally down-regulated 9 (NEDD9)

Human protein-coding gene NEDD9. Represented by 463 ESTs from 222 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 136582 - Hs.37982]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001135865.1 NEDD9 gene product H. sapiens 100.0 833
XP_518238.3 PREDICTED: enhancer of filamentation 1 isoform 2 P. troglodytes 100.0 173
NP_059492.3 Nedd9 gene product M. musculus 92.8 832
NP_001083120.1 breast cancer anti-estrogen resistance 1 X. laevis 60.2 236
NP_001070750.1 nedd9 gene product D. rerio 57.1 781
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003897108.1 PREDICTED: enhancer of filamentation 1 isoform 2 P. anubis 99.2 833
XP_001088846.1 PREDICTED: enhancer of filamentation 1-like isoform 1 M. mulatta 98.9 833

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; placenta; uncharacterized tissue; kidney; bone; muscle; uterus; testis; cervix; mixed; intestine; embryonic tissue; lymph node; pancreas; pharynx; adipose tissue; blood; skin; vascular; prostate; ovary; mouth; amniotic fluid; bladder; thymus; ganglia; trachea; mammary gland; eye; connective tissue; ascites; lymph; stomach; liver; heart; spleen; umbilical cord; pituitary gland; esophagus; thyroid; larynx; nerve; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p25-p24
UniSTS entry: Chr 6 RH15834 [Map Viewer]
UniSTS entry: Chr 6 RH69676
UniSTS entry: Chr 6 RH46700
UniSTS entry: Chr 6 D6S2064
UniSTS entry: Chr 6 A002S01 [Map Viewer]
UniSTS entry: Chr 6 D6S1194E
UniSTS entry: Chr 6 G30970
UniSTS entry: Chr 6 G60230
UniSTS entry: Chr 6 WI-13606 [Map Viewer]
UniSTS entry: Chr 1 RH80030
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC050740.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9, mRNA (cDNA clone IMAGE:6193276), containing frame-shift errors PA
NM_182966.3 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 2, mRNA PA
BX648041.1 Homo sapiens mRNA; cDNA DKFZp686G08168 (from clone DKFZp686G08168) P
AK124210.1 Homo sapiens cDNA FLJ42216 fis, clone THYMU2037348
NM_006403.3 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA PA
L43821.1 Homo sapiens enhancer of filamentation (HEF1) mRNA, complete cds P
AJ420493.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1681585 PA
AK292682.1 Homo sapiens cDNA FLJ75094 complete cds, highly similar to Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA PA
U64317.1 Human Crk-associated substrate related protein Cas-L mRNA, complete cds P
BC020686.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9, mRNA (cDNA clone IMAGE:4717875), complete cds PA
NM_001142393.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 3, mRNA PA
NR_073131.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 5, non-coding RNA PA
NM_001271033.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 4, mRNA PA
BC040207.1 Homo sapiens neural precursor cell expressed, developmentally down-regulated 9, mRNA (cDNA clone MGC:41852 IMAGE:4820745), complete cds PA

EST sequences (10 of 463) [Show all sequences]

AA910809.1 Clone IMAGE:1520906 lung 3' read
R17863.1 Clone IMAGE:31793 brain 5' read
AI066554.1 Clone IMAGE:1566196 mixed 3' read PA
AI091525.1 Clone IMAGE:1567024 mixed 3' read
AI084816.1 Clone IMAGE:1653980 mixed 3' read P
AI084758.1 Clone IMAGE:1681585 skin 3' read
BX092614.1 Clone IMAGp998D21267_;_IMAGE:43837 brain A
AI200147.1 Clone IMAGE:1757943 placenta 3' read A
AI338165.1 Clone IMAGE:1951224 lung 3' read
AI360799.1 Clone IMAGE:2010616 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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