Calponin homology domain containing 2 (CHDC2)

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:201497 UniGene Hs.376425 Homo sapiens (human) CHDC2

Order cDNA clone, Links

Calponin homology domain containing 2 (CHDC2)

Human protein-coding gene CHDC2. Represented by 3 ESTs from 2 cDNA libraries. Corresponds to reference sequence NM_173695.2. [UniGene 201497 - Hs.376425]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_775966.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CHDC2 gene product	H. sapiens	100.0	501
XP_003086887.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein CXorf59-like	M. musculus	62.9	561
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_003917605.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein CXorf59 homolog	P. anubis	91.9	503
XP_001084004.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: hypothetical protein LOC695378	M. mulatta	88.1	536

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; trachea

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	X
	Map position:	Xp21.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_173695.2	Homo sapiens calponin homology domain containing 2 (CHDC2), mRNA	PA
BC101700.1	Homo sapiens chromosome X open reading frame 59, mRNA (cDNA clone MGC:126749 IMAGE:8069206), complete cds	P
BC101698.1	Homo sapiens chromosome X open reading frame 59, mRNA (cDNA clone MGC:126747 IMAGE:8069204), complete cds	P
AK093920.1	Homo sapiens cDNA FLJ36601 fis, clone TRACH2014972	P

EST sequences (3)

DV080519.1	Clone MGC9.8.1.1.1.E12	mixed		P
DV080520.1	Clone MGC9.8.1.1.1.E12	mixed		P
DB203913.1	Clone TRACH2014972	trachea	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria