> Tumor protein, translationally-controlled 1 (TPT1)
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UGID:200731     UniGene Hs.374596     Homo sapiens (human)   TPT1 Order cDNA clone, Links
Tumor protein, translationally-controlled 1 (TPT1)

Human protein-coding gene TPT1. Represented by 8318 ESTs from 1012 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 200731 - Hs.374596]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_446319.1 Tpt1 gene product R. norvegicus 100.0 171
NP_003286.1 TPT1 gene product H. sapiens 100.0 171
NP_001014410.1 TPT1 gene product B. taurus 100.0 171
XP_003919655.1 PREDICTED: LOW QUALITY PROTEIN: translationally-controlled tumor protein P. anubis 99.5 203
NP_568658.1 cullin4 A. thaliana 75.9 112
NP_904328.1 NADH dehydrogenase subunit 1 M. musculus 72.4 312
XP_001703219.1 cullin C. reinhardtii 70.5 112
NP_059331.1 NADH dehydrogenase subunit 1 D. rerio 63.6 315
NP_008134.1 NADH dehydrogenase subunit 1 X. laevis 60.1 315
NP_008289.1 NADH dehydrogenase subunit 1 (mitochondrion) D. melanogaster 45.9 307
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_001364056.1 PREDICTED: translationally-controlled tumor protein-like M. domestica 94.2 171
XP_003203374.1 PREDICTED: translationally-controlled tumor protein homolog M. gallopavo 91.9 159

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; prostate; intestine; muscle; testis; lung; uterus; stomach; blood; amniotic fluid; uncharacterized tissue; embryonic tissue; eye; liver; placenta; pharynx; mammary gland; kidney; heart; mixed; thyroid; skin; vascular; ovary; bone; connective tissue; thymus; mouth; lymph node; bone marrow; spleen; umbilical cord; ear; ascites; cervix; lymph; tonsil; adipose tissue; adrenal gland; parathyroid; salivary gland; larynx; bladder; pituitary gland; trachea; nerve; esophagus; pineal gland; epididymis; ganglia; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q14
UniSTS entry: Chr X RH41035
UniSTS entry: Chr 13 RH68285
UniSTS entry: Chr 13 G26329
UniSTS entry: Chr 13 GDB:554914
UniSTS entry: Chr 13 HUM000S635 [Map Viewer]
UniSTS entry: Trt
UniSTS entry: Chr 11 WI-12191 [Map Viewer]
UniSTS entry: Chr 4 D1S3697
UniSTS entry: Chr 11 G43322
UniSTS entry: Chr 15 M89913
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AY117678.1 Homo sapiens p02 protein mRNA, complete cds PA
BC052333.1 Homo sapiens tumor protein, translationally-controlled 1, mRNA (cDNA clone MGC:61507 IMAGE:6058799), complete cds PA
AY334563.1 Homo sapiens cell-type eosinophil TCTP mRNA, complete cds P
AK130847.1 Homo sapiens cDNA FLJ27337 fis, clone TMS09488, highly similar to Translationally controlled tumor protein P
NM_003295.2 Homo sapiens tumor protein, translationally-controlled 1 (TPT1), mRNA P
AJ609441.1 Homo sapiens ACA31 snoRNA gene
CR457036.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0415D for gene TPT1, tumor protein, translationally-controlled 1; complete cds, incl. stopcodon P
AY952884.2 Homo sapiens antigen MMSA-4 mRNA sequence PA
NR_002967.1 Homo sapiens small nucleolar RNA, H/ACA box 31 (SNORA31), small nucleolar RNA
BC003352.2 Homo sapiens tumor protein, translationally-controlled 1, mRNA (cDNA clone MGC:5308 IMAGE:2899964), complete cds PA
BC007842.1 Homo sapiens cDNA clone IMAGE:4128378, **** WARNING: chimeric clone **** PA
BC012431.1 Homo sapiens tumor protein, translationally-controlled 1, mRNA (cDNA clone MGC:9981 IMAGE:3880559), complete cds PA
BC022436.1 Homo sapiens tumor protein, translationally-controlled 1, mRNA (cDNA clone MGC:24736 IMAGE:4281364), complete cds PA
AK312951.1 Homo sapiens cDNA, FLJ93407, Homo sapiens tumor protein, translationally-controlled 1 (TPT1),mRNA P
AK296952.1 Homo sapiens cDNA FLJ57742 complete cds
AK296587.1 Homo sapiens cDNA FLJ57738 complete cds, highly similar to Translationally-controlled tumor protein PA
X64899.1 H.sapiens mRNA homologous to mouse P21 mRNA P
L13806.1 Homo sapiens (clone 04) translationally controlled tumor protein mRNA, 3' end P
X16064.1 Human mRNA for translationally controlled tumor protein P
BC040008.1 Homo sapiens tumor protein, translationally-controlled 1, mRNA (cDNA clone IMAGE:5219529), complete cds A

EST sequences (10 of 8318) [Show all sequences]

AA954150.1 Clone IMAGE:1591297 kidney 3' read PA
AA954812.1 Clone IMAGE:1574318 kidney 3' read A
AA961241.1 Clone IMAGE:1552109 uncharacterized tissue 3' read A
AA862692.1 Clone IMAGE:1469076 uncharacterized tissue 3' read A
AA865517.1 Clone IMAGE:1459293 kidney 3' read A
AA865518.1 Clone IMAGE:1459295 kidney 3' read A
AA961389.1 Clone IMAGE:1597838 uncharacterized tissue 3' read
AA961573.1 Clone IMAGE:1592631 kidney 3' read PA
AA961863.1 Clone IMAGE:1598670 uncharacterized tissue 3' read A
AA962120.1 Clone IMAGE:1600283 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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