> Secretory carrier membrane protein 5 (SCAMP5)
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UGID:200581     UniGene Hs.374180     Homo sapiens (human)   SCAMP5 Order cDNA clone, Links
Secretory carrier membrane protein 5 (SCAMP5)

Human protein-coding gene SCAMP5. Represented by 383 ESTs from 136 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 200581 - Hs.374180]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001099073.1 PREDICTED: secretory carrier-associated membrane protein 5-like M. mulatta 100.0 234
NP_620417.1 SCAMP5 gene product H. sapiens 100.0 234
XP_003901268.1 PREDICTED: secretory carrier-associated membrane protein 5 P. anubis 100.0 199
NP_064666.1 secretory carrier-associated membrane protein 5 M. musculus 99.6 234
NP_001160037.1 SCAMP5 gene product B. taurus 99.6 234
NP_001086136.1 secretory carrier-associated membrane protein 5B X. laevis 90.2 234
NP_991110.1 scamp5 gene product D. rerio 85.7 229
NP_573023.2 scamp, isoform A D. melanogaster 49.8 211
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_003314836.1 PREDICTED: secretory carrier-associated membrane protein 5 isoform 2 P. troglodytes 99.2 242
NP_113914.1 Scamp5 gene product R. norvegicus 99.2 234

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; eye; blood; uterus; liver; intestine; mixed; embryonic tissue; mammary gland; kidney; lung; muscle; heart; bladder; mouth; adrenal gland; ovary; placenta; nerve; connective tissue; pancreas; cervix; parathyroid; stomach; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q24.2
UniSTS entry: Chr 15 RH192
UniSTS entry: Chr 15 A001Y23
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AK127480.1 Homo sapiens cDNA FLJ45572 fis, clone BRTHA3010717, highly similar to Secretory carrier-associated membrane protein 5 PA
AK126940.1 Homo sapiens cDNA FLJ44993 fis, clone BRAWH3010461, highly similar to Secretory carrier-associated membrane protein 5 P
AL360203.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 222616 A
AL390185.1 Homo sapiens mRNA; cDNA DKFZp547N096 (from clone DKFZp547N096) A
CR936761.1 Homo sapiens mRNA; cDNA DKFZp686L1799 (from clone DKFZp686L1799) PA
AK025678.1 Homo sapiens cDNA: FLJ22025 fis, clone HEP08518
BC141943.1 Homo sapiens cDNA clone IMAGE:40132534
BC141942.1 Homo sapiens cDNA clone IMAGE:40132533
BC150507.1 Homo sapiens cDNA clone IMAGE:40132537
BC150506.1 Homo sapiens cDNA clone IMAGE:40132535
AK056438.1 Homo sapiens cDNA FLJ31876 fis, clone NT2RP7002478, highly similar to Secretory carrier-associated membrane protein 5 P
BC024700.1 Homo sapiens secretory carrier membrane protein 5, mRNA (cDNA clone MGC:24969 IMAGE:4941050), complete cds PA
NM_138967.3 Homo sapiens secretory carrier membrane protein 5 (SCAMP5), transcript variant 3, mRNA PA
AF495715.1 Homo sapiens secretory carrier membrane protein 5 mRNA, complete cds P
AL834226.1 Homo sapiens mRNA; cDNA DKFZp761D1321 (from clone DKFZp761D1321) PA
AL833230.1 Homo sapiens mRNA; cDNA DKFZp667P057 (from clone DKFZp667P057) A
AK301505.1 Homo sapiens cDNA FLJ50896 complete cds, highly similar to Secretory carrier-associated membrane protein 5 P
NM_001178112.1 Homo sapiens secretory carrier membrane protein 5 (SCAMP5), transcript variant 2, mRNA PA
NM_001178111.1 Homo sapiens secretory carrier membrane protein 5 (SCAMP5), transcript variant 1, mRNA PA
NR_033660.1 Homo sapiens secretory carrier membrane protein 5 (SCAMP5), transcript variant 4, non-coding RNA PA

EST sequences (10 of 383) [Show all sequences]

AA928538.1 Clone IMAGE:1552843 uncharacterized tissue 3' read A
R21399.1 Clone IMAGE:36205 brain 5' read
CB160595.1 Clone L18POOL1n1-21-F03 liver 5' read
CB148199.1 Clone B1T694954-14-D07 brain 5' read
CB152267.1 Clone B1T694954-15-D05 brain 5' read
CB152729.1 Clone B1T694954-30-A01 brain 5' read
CB152049.1 Clone B1T694954-17-F12 brain 5' read
CB153134.1 Clone B1T694954-23-B11 brain 5' read
CB153673.1 Clone B1T694954-26-E01 brain 5' read
CB155244.1 Clone B2N807043-14-B03 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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