> Heterogeneous nuclear ribonucleoprotein R (HNRNPR)
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UGID:200344     UniGene Hs.373763     Homo sapiens (human)   HNRNPR Order cDNA clone, Links
Heterogeneous nuclear ribonucleoprotein R (HNRNPR)

Human protein-coding gene HNRNPR. Represented by 1109 ESTs from 376 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 200344 - Hs.373763]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001111802.2 PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform 1 M. mulatta 100.0 635
NP_001095868.1 HNRNPR gene product H. sapiens 100.0 635
XP_003891352.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2 P. anubis 100.0 632
XP_513191.3 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 4 P. troglodytes 100.0 632
XP_852945.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2 C. lupus familiaris 100.0 632
XP_001501475.3 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1 E. caballus 100.0 632
NP_001076077.1 HNRNPR gene product B. taurus 100.0 632
XP_004005182.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1 O. aries 100.0 632
XP_001366091.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R M. domestica 99.8 632
NP_083147.1 Hnrnpr gene product M. musculus 99.8 631
NP_783193.2 Hnrnpr gene product R. norvegicus 99.8 631
XP_003127745.2 PREDICTED: heterogeneous nuclear ribonucleoprotein R S. scrofa 99.8 588
NP_001084953.1 synaptotagmin binding, cytoplasmic RNA interacting protein X. laevis 87.1 617
NP_999861.1 syncrip gene product D. rerio 87.0 624
NP_650913.2 syncrip, isoform B D. melanogaster 58.5 690
NP_493049.2 Protein HRP-2, isoform a C. elegans 56.2 422
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_003228911.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R-like A. carolinensis 99.2 631
NP_001006309.3 heterogeneous nuclear ribonucleoprotein R G. gallus 99.0 632

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; testis; uncharacterized tissue; placenta; liver; eye; bone; skin; kidney; uterus; mixed; prostate; cervix; mammary gland; ovary; ear; thymus; pancreas; lung; blood; intestine; muscle; vascular; parathyroid; stomach; mouth; connective tissue; thyroid; spleen; heart; adrenal gland; pharynx; amniotic fluid; trachea; bone marrow; ascites; lymph node; umbilical cord; lymph; larynx; esophagus; salivary gland; bladder; pituitary gland; adipose tissue; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.12
UniSTS entry: D10S1272E
UniSTS entry: UniSTS:479130
UniSTS entry: Chr 1 SHGC-32988 [Map Viewer]
UniSTS entry: Chr 1 A007E15
UniSTS entry: Chr 1 WI-17999 [Map Viewer]
UniSTS entry: Chr 1 SHGC-132486
UniSTS entry: RH93292
UniSTS entry: Chr 1 HNRPR_V254
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BX538163.1 Homo sapiens mRNA; cDNA DKFZp686O0665 (from clone DKFZp686O0665); complete cds PA
BX647784.1 Homo sapiens mRNA; cDNA DKFZp686F0586 (from clone DKFZp686F0586) PA
BX640912.1 Homo sapiens mRNA; cDNA DKFZp686A13234 (from clone DKFZp686A13234) PA
NM_005826.3 Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 2, mRNA PA
AK001846.1 Homo sapiens cDNA FLJ10984 fis, clone PLACE1001810
DQ351905.1 Homo sapiens heterogeneous nuclear ribonucleoprotein-R2 mRNA, complete cds P
BC001449.2 Homo sapiens heterogeneous nuclear ribonucleoprotein R, mRNA (cDNA clone MGC:2039 IMAGE:3139052), complete cds PA
BC110389.1 Homo sapiens heterogeneous nuclear ribonucleoprotein R, mRNA (cDNA clone IMAGE:5187023), partial cds PA
NM_001102399.1 Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 3, mRNA PA
NM_001102398.1 Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 1, mRNA PA
NM_001102397.1 Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 4, mRNA PA
AK311519.1 Homo sapiens cDNA, FLJ18561 P
AK313142.1 Homo sapiens cDNA, FLJ93632, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRPR), mRNA P
AK098580.1 Homo sapiens cDNA FLJ25714 fis, clone TST05093, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein R mRNA P
AK300029.1 Homo sapiens cDNA FLJ54544 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein R P
AK297405.1 Homo sapiens cDNA FLJ53360 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein R P
AK297382.1 Homo sapiens cDNA FLJ53358 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein R P
AF000364.1 Homo sapiens heterogeneous nuclear ribonucleoprotein R mRNA, complete cds PA

EST sequences (10 of 1109) [Show all sequences]

AI016354.1 Clone IMAGE:1623652 embryonic tissue 3' read A
T05872.1 Clone HFBDH71 brain P
T05903.1 Clone HFBDI37 brain P
AI092268.1 Clone IMAGE:1683290 parathyroid 3' read A
CB048974.1 Clone IMAGE:3271174 prostate 3' read A
CB048975.1 Clone IMAGE:3271174 prostate 5' read A
AI086134.1 Clone IMAGE:1677773 mixed 3' read
BX095567.1 Clone IMAGp998I056074_;_IMAGE:2443084 uterus A
BX109194.1 Clone IMAGp998F21388_;_IMAGE:201620 mixed
AI174621.1 Clone IMAGE:1701830 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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