> Bardet-Biedl syndrome 9 (BBS9)
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UGID:199824     UniGene Hs.372360     Homo sapiens (human)   BBS9 Order cDNA clone, Links
Bardet-Biedl syndrome 9 (BBS9)

Human protein-coding gene BBS9. Represented by 255 ESTs from 104 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 199824 - Hs.372360]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_940820.1 BBS9 gene product H. sapiens 100.0 886
XP_001168457.1 PREDICTED: protein PTHB1 isoform 7 P. troglodytes 99.9 886
NP_848502.1 Bbs9 gene product M. musculus 90.9 879
NP_001087412.1 protein PTHB1 X. laevis 81.2 841
XP_002664838.1 PREDICTED: protein PTHB1, partial D. rerio 69.6 869
XP_001692266.1 bardet-biedl syndrome 9 protein C. reinhardtii 51.8 195
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003896173.1 PREDICTED: protein PTHB1-like, partial P. anubis 99.5 563
XP_001107028.1 PREDICTED: protein PTHB1-like isoform 9 M. mulatta 98.9 886

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; thymus; kidney; thyroid; connective tissue; prostate; larynx; ear; trachea; uterus; mixed; skin; adipose tissue; uncharacterized tissue; heart; pancreas; eye; lung; muscle; embryonic tissue; liver; placenta; spleen; bone; pituitary gland; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p14
UniSTS entry: Chr 7 G32246
UniSTS entry: Chr 7 A005O06
UniSTS entry: Chr 7 D7S2758 [Map Viewer]
UniSTS entry: Chr 7 D7S2045E
UniSTS entry: Chr 7 WI-14062 [Map Viewer]
UniSTS entry: Chr 7 B1__4409
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BX647385.1 Homo sapiens mRNA; cDNA DKFZp686A12144 (from clone DKFZp686A12144) PA
NM_198428.2 Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript variant 2, mRNA P
AF095771.1 Homo sapiens PTH-responsive osteosarcoma B1 protein (B1) mRNA, complete cds P
BC103831.2 Homo sapiens Bardet-Biedl syndrome 9, mRNA (cDNA clone MGC:118917 IMAGE:40001794), complete cds P
NM_001033605.1 Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript variant 4, mRNA P
NM_001033604.1 Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript variant 3, mRNA P
NM_014451.3 Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript variant 1, mRNA PA
AK057660.1 Homo sapiens cDNA FLJ33098 fis, clone TRACH2000780, highly similar to Parathyroid hormone-responsiveB1 gene protein P
AK314627.1 Homo sapiens cDNA, FLJ95469 P
BC032715.1 Homo sapiens Bardet-Biedl syndrome 9, mRNA (cDNA clone IMAGE:5519851), complete cds PA
AK091361.1 Homo sapiens cDNA FLJ34042 fis, clone FCBBF2006418, highly similar to Parathyroid hormone-responsive B1 gene protein P
AK297436.1 Homo sapiens cDNA FLJ53605 complete cds, highly similar to Parathyroid hormone-responsive B1 gene protein P
AF095769.1 Homo sapiens PTH-responsive osteosarcoma mRNA, partial 3'UTR A
U85994.1 Human clone IMAGE:30008 unknown protein mRNA, partial cds P
U85995.1 Human clone IMAGE:22181 unknown protein mRNA, partial cds P
U87408.1 Human clone IMAGE:74593 unknown protein mRNA, partial cds P

EST sequences (10 of 255) [Show all sequences]

R16316.1 Clone IMAGE:30008 brain 5' read P
AI015944.1 Clone IMAGE:1638453 testis 3' read
AA922064.1 Clone IMAGE:1543979 mixed 3' read A
AI038295.1 Clone IMAGE:1659542 embryonic tissue 3' read A
AI042560.1 Clone IMAGE:1665094 skin 3' read
AI128578.1 Clone IMAGE:1691244 heart 3' read A
BX101186.1 Clone IMAGp998A101961_;_IMAGE:795153 testis P
AI272000.1 Clone IMAGE:1866088 kidney 3' read PA
CB153629.1 Clone B1T694954-33-H04 brain 5' read P
AI338659.1 Clone IMAGE:1951626 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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